Pairwise Alignments

Query, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 7/176 (3%)

Query: 41  GLRRLLGLILLLASA--SLPAEVLRLAGNLWPPYTDRSLPGEGLSVELIRTALGRGGYQV 98
           GL + L + LL  SA  S+ A+ L L    WPPY+   L  +G S+ +++ A+   G+++
Sbjct: 4   GLSKWLWIPLLSLSAAFSVKADTLILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHEL 63

Query: 99  EYIEVPWERALLGLRKGSYDLVNGWPAVKRVDYS-LSSRAFLINRMRWVQRRGSGIRYDG 157
                PW RA + L KG       +P     D S L S +     + + +   + I++  
Sbjct: 64  VVEFYPWSRA-VHLAKGEAKYSGYFPEYFFEDNSLLFSDSIGKGPLGFAENVANPIQWSV 122

Query: 158 LDSLTGYLLVLSRGYTYSDELD---ADTRLQKGYAANFVQAATMVLAGRADLTLED 210
           L+ L  + + + R Y  + ELD   A  +L      + VQ    V  GR  L + D
Sbjct: 123 LEDLKPHTIGVVRDYINTPELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVID 178