Pairwise Alignments

Query, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 259 a.a., amino acid ABC transporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.5 bits (127), Expect = 5e-12
 Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 24/258 (9%)

Query: 42  LRRLLGLILLLASASLPAEV--LRLAG-NLWPPYTDRSLPGEGLSVELIRTALGRGGYQV 98
           LR ++ ++ LL S  + +    +RLA  + WPP+ D +  GEGLS  LI  A    G  V
Sbjct: 6   LRSVMSIVFLLFSTMVSSNETSIRLAAEDSWPPFADAA--GEGLSHRLIAKAFALEGIYV 63

Query: 99  EYIEVPWERALLGLRKGSYDLVNGWPAVK--RVDYSLSSRAFLINRMRWVQ-RRGSGIRY 155
           + + VP+ R L+   +G  + V      +  R  +        +    + Q  R + +  
Sbjct: 64  DTLVVPYNRGLILTEQGKVNAVFNVAMQQNTRERFWFGEEPLFVATASFYQLSRNAPLAK 123

Query: 156 DGLDSLTGYLLVLSRGYTYSDELDADTRLQKGYAANFVQAATMVLAGRADLTLEDERTAL 215
           D         + + RGY Y DE D    +      N  Q   ++L  + D  +  +R A 
Sbjct: 124 DKWSLPKDTRVGIVRGYEYGDEFDRLPNMVLKIVDNQYQLINLLLTDKVDAVVMYDRVAA 183

Query: 216 FHFERELGHERDALAFVPGEFRRV------ELSLLVRRDHPRATDIIATFNREIAAMLAD 269
             F   +G        V GE R V      EL L   + +P +  +    ++ +  + A 
Sbjct: 184 -QFLYTMG--------VSGEVRAVMANHSSELFLAFDKHNPDSPALADALDKGLRQLKAS 234

Query: 270 GSYAAIFVRHALPVPDGL 287
           G Y ++ +      P+GL
Sbjct: 235 GEYHSL-IAGVTSAPEGL 251