Pairwise Alignments

Query, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 286 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 4/215 (1%)

Query: 67  NLWPPYTDRSLPGEGLSVELIRTALGRGGYQVEYIEVPWERALLGLRKGSYDLVNG-WPA 125
           N +PP+    +   G+   L+       GY + +   P+ RA   +++   DL+ G W  
Sbjct: 58  NDYPPFYSPQMSEWGVVYHLVEAVFEHAGYPLSHEFYPFIRAQTLIKRELADLIIGVWYR 117

Query: 126 VKRVDYSLSSRAFLINRMRWVQRRGSGIRYDGLDSLTGYLLVLSRGYTYSDELDADTRLQ 185
            +R  +   S   L   +R  +R  S I +  +  L  YL+ + RGY  +        L 
Sbjct: 118 PEREQWIDFSDPLLSVSIRLYKRSDSKIVFRDIKDLKPYLIGIGRGYA-NPVAFGQANLN 176

Query: 186 KGYAANFVQAATMVLAGRADLTLEDERTALFHFERELGHERDALAFVPGEFRRVEL-SLL 244
              A++       +LAGR DL L  E  A +  ER  G E +      G+   VEL  + 
Sbjct: 177 TEAASSDAVNLRKLLAGRVDLVLICEDVARYLIERP-GSEYNGKLEPVGDPLSVELFHIG 235

Query: 245 VRRDHPRATDIIATFNREIAAMLADGSYAAIFVRH 279
           V +  P A  I+A FN+ +A +   G    I   H
Sbjct: 236 VAKHLPNARQILADFNQSLAELHRSGELTKILASH 270