Pairwise Alignments

Query, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 272 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 13/215 (6%)

Query: 65  AGNLWPPYTDRSLPGEGLSVELIRTALGRGGYQVEYIEVPWERALLGLRKGSYDLVNG-- 122
           A + WPP+ ++   G+G+S  LI  A  +   +V  + VP+ RAL+   KG+ D V    
Sbjct: 57  AEDSWPPFANQF--GQGISHRLIAAAFKQSQVEVNSLVVPYSRALMMAEKGAVDGVFNVT 114

Query: 123 WPAVKRVDYSLSSRAFLINRMRWVQRRGSG-IRYDGLDSLTGYLLVLSRGYTYSD---EL 178
             A     +   +    + +  + QR+    I  +  +   G ++ + + Y Y D   EL
Sbjct: 115 REASTEQRFVFGNTPLFVAKASFYQRKQRPLIAANKWEIPKGSIVGVIKSYEYGDEFPEL 174

Query: 179 DADTRLQKGYAANFVQAATMVLAGRADLTLEDERTALFHFERELGHERDAL-AFVPGEFR 237
               +L     AN  Q   +++ GR D  +  +  A  + ++ +G   D + AF      
Sbjct: 175 VKQRQLNVITVANQQQLINLLMIGRVDAAVMFDLVAQENLQK-MGVSDDVIPAF---NNH 230

Query: 238 RVELSLLVRRDHPRATDIIATFNREIAAMLADGSY 272
             E+ L   +++P+A  +    +  +  + A+G Y
Sbjct: 231 SSEIYLAFSKENPKAAQLAKELDLGLTQLKANGQY 265