Pairwise Alignments

Query, 481 a.a., Long-chain acyl-CoA synthetases (AMP-forming) from Pseudomonas stutzeri RCH2

Subject, 605 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  135 bits (340), Expect = 4e-36
 Identities = 150/556 (26%), Positives = 226/556 (40%), Gaps = 110/556 (19%)

Query: 28  SYAELRHEVATRACQLEQLGV---QRVALALDNGLEWALWDLALLRAKLVCVPLPAFFSA 84
           S+A +  +V   A  +   G+    RV LA +N  +W + DLA+L A  + VP  A  + 
Sbjct: 46  SWASVHDQVIALANAMIDQGLAPGDRVVLASENRPDWTIADLAILAAGAIPVPAYATHTE 105

Query: 85  AQQEHVLQHAGIDCLIGGPSALSERCGFQPGEAG----LLLRQLETVTPVPPGTL----- 135
           A   HVL +      I     ++ER       A     +++   +    VP G       
Sbjct: 106 ADHLHVLDNVEAAMAIVSTPLVAERFLRAAARAKRRPLVVMMDFDDAVVVPAGLTVLAWN 165

Query: 136 ------------------------KITYTSGTTGQPKGVCLDAEAQLAVAESLRQA---- 167
                                    I +TSGT G PKGV L   A  ++  +   A    
Sbjct: 166 AMMAEGEGRGVPAVVHRIQTDDLASIIHTSGTGGTPKGVML---AHRSILHNCHGAFKLL 222

Query: 168 -SLACDVQQHLCVLPLATLLENIAGLYAPL--------------LAGARIDLRP------ 206
            ++  + +  L  LPL    E+  GL+ P+              LA   ++ +P      
Sbjct: 223 ETIGLEEEVFLSFLPLCHSYEHTTGLFFPISLGAQVYFAEGAETLAANMVEAKPTIMTAV 282

Query: 207 -----------LAEIGFSGAAGFELPCFVTTLNENR---PHSLILLPQLL-LALVSAAEQ 251
                      L  +   G    ++      L   R   P SL +  +L   AL      
Sbjct: 283 PRLYEMMRARILRAVEKEGGLKEKMFREAVDLGRRRMDDPASLGVKDKLTDAALDKLVRH 342

Query: 252 GVPLPTSLRFIAV--GGGRVAPQLLERAERLGLPVFEGYGLSECASVVCLNTPEARCIGT 309
            V      R  A+  GGG + P +      LG+PV +GYGL+E A VV  N P+   + T
Sbjct: 343 AVKARFGGRLKAMISGGGPLNPDVGYFFRALGIPVLQGYGLTETAPVVSCNMPKKVKMNT 402

Query: 310 VGRPLAHVGLRLADDGEVLVKGPRML-GYLGEPPQA------GEWLATGDLGHF-EDGFL 361
           VG  L  V +R+A DGE+LVKGP ++ GY  +P           WL TGD+G   EDGF+
Sbjct: 403 VGPALYGVDIRIASDGEILVKGPLVMDGYWNDPESTRAVLDPDGWLHTGDVGTLDEDGFI 462

Query: 362 ILHGRKKHQFVTAYGRNVNPEWVEAELVQQAPIAQAWLHGEALPQNVAVLVPRHPELS-- 419
            +  RKK   V + G N++P+ VE  L  +  I    + G+ +P  VA++VP    L+  
Sbjct: 463 QITDRKKDLIVNSGGHNISPQRVEGILGLEPEIGVGVVFGDRMPHLVALIVPEKEFLARW 522

Query: 420 ---------------DADLQAAI----DRVNAGLPDYARVHHWLRADAPFTAGNGLATAN 460
                          DADL+ AI    +R NA L    ++  +     P +  N   T +
Sbjct: 523 SKETGKPADLALVYEDADLRQAIGKAVERANAKLGTVEKIRKFALLPEPMSVENDQLTHS 582

Query: 461 GRLRRNALINRYQSAI 476
            + RR+ L +RY + I
Sbjct: 583 MKARRHVLRDRYGALI 598