Pairwise Alignments

Query, 375 a.a., 16S RNA G1207 methylase RsmC from Pseudomonas stutzeri RCH2

Subject, 332 a.a., Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) from Pseudomonas fluorescens FW300-N2E2

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 72/270 (26%), Positives = 111/270 (41%), Gaps = 10/270 (3%)

Query: 109 FDLVLIRVPKTLALLEEQLIRLHGQLSPGAQVIAAAMIKHLPRAAGDLLEQYIGAVQASL 168
           FD  ++ +PK   L +  L  +  +L+ G +V      +     A   L  + G  +   
Sbjct: 68  FDTAVVFLPKAKDLTDYILNAVAARLA-GREVYLVGEKRSGIEGASKQLNPF-GKPRKLD 125

Query: 169 AVKKARLLSATASEKP--APQSPYPTRYRLD--QPKLELLNHANLFCREGLDIGTRAFLP 224
           + +  +L   T +  P   P       Y L   +  L++++   +F    LD G+   L 
Sbjct: 126 SARHCQLWQVTVANAPEATPLESLAQTYELPLAEGPLKVISLPGVFSHGRLDRGSALLLE 185

Query: 225 HLPQALGALRVADLGCGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQAILGERPA 284
           HL + L +  + D GCG GVLG       P   +TL+D    A  S+R    A      A
Sbjct: 186 HLDK-LPSGHLLDFGCGAGVLGAAVKRRYPHNTVTLLDVDAFAAASSRLTLAA--NGLEA 242

Query: 285 DIRAGDGLAEQAPGSLDLVLCNPPFHQQQVVGDFLAWRMFTQAKAALAKGGELWIVGNRH 344
           ++  GDG+ + AP  L  +L NPPFH            +  +A   L  GGEL +V N  
Sbjct: 243 EVLTGDGI-DAAPMGLSAILSNPPFHVGVHTDYHATENLLRKAAKHLKNGGELRLVANSF 301

Query: 345 LGYHLKLKRLFGNAEQVAATPKFVIIKATR 374
           L Y   ++   G     A    F I +A R
Sbjct: 302 LKYQPLIEEHLGVCAIKAEGQGFRIYRAKR 331