Pairwise Alignments

Query, 375 a.a., 16S RNA G1207 methylase RsmC from Pseudomonas stutzeri RCH2

Subject, 376 a.a., ribosomal RNA large subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

 Score =  252 bits (643), Expect = 1e-71
 Identities = 142/368 (38%), Positives = 215/368 (58%), Gaps = 4/368 (1%)

Query: 10  SLDLIRQPEQPNEPLQAFDAADEYLLATLHEQGLPAAARVLILNDSFGALACALAAHVEV 69
           +L L R P++ NE LQA+DA DEYL+  + +  LP ++ ++I+ND FG L+C  +   +V
Sbjct: 11  TLTLHRFPKRNNETLQAWDAGDEYLIQHVEQLALPESSHIVIINDHFGTLSCWFSQKHKV 70

Query: 70  TSSGDSHLAHLALQKNLARNGISETRVTFVPASEMAQGPFDLVLIRVPKTLALLEEQLIR 129
           +   DS++AH A Q NL +N      V  +   +       +VL+++PK+   L   L +
Sbjct: 71  SMMSDSYIAHQATQANLQQN--QRPPVQLLTTLDPVPNDASVVLLQLPKSNRHLVWILSQ 128

Query: 130 LHGQLSPGAQVIAAAMIKHLPRAAGDLLEQYIGAVQASLAVKKARLLSATASEKPAPQSP 189
           L   LSP   +IA    K +  +  +L E+++G    SLA KK RL+ ++A+  PA +  
Sbjct: 129 LRKALSPNIPIIAVNKAKEIHTSTLNLFEKHLGPTTTSLAWKKHRLVFSSATVNPANEVN 188

Query: 190 YPTRYRLDQPKLELLNHANLFCREGLDIGTRAFLPHLPQALGALRVADLGCGNGVLGIVY 249
               + ++   + L N  N++  E LD+G+R  L HLP         DLGCGNGVL +  
Sbjct: 189 PECGWSIEPYAITLTNLPNVYSGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRL 248

Query: 250 ALGNPQAELTLVDESYMAVQSARENWQAILGERPADIRAGDGLAEQAPGSLDLVLCNPPF 309
              NPQA++T VDES+MA+ SA++N    LG+R     A + L      S  +++CNPPF
Sbjct: 249 GQLNPQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPF 308

Query: 310 HQQQVVGDFLAWRMFTQAKAALAKGGELWIVGNRHLGYHLKLKRLFG--NAEQVAATPKF 367
           HQQQ + D +AW+MF  +K  L KGG+LW++GNRHLGY +KL RLFG  +   +A   KF
Sbjct: 309 HQQQTITDHIAWQMFCDSKHVLKKGGKLWVIGNRHLGYDVKLARLFGKSHVRVIANNSKF 368

Query: 368 VIIKATRA 375
           VI++A ++
Sbjct: 369 VILQAIKS 376