Pairwise Alignments

Query, 375 a.a., 16S RNA G1207 methylase RsmC from Pseudomonas stutzeri RCH2

Subject, 200 a.a., class I SAM-dependent methyltransferase from Methanococcus maripaludis S2

 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 10/142 (7%)

Query: 235 VADLGCGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQAI-LGERPADIRAGDGLA 293
           V D+GCG GV+GI  ++ +    +T+ D +  +V   R+N +     E+  ++  GD   
Sbjct: 59  VLDVGCGYGVIGI--SIADEVNSVTMTDLNNRSVGLTRKNIKLNGKSEKNIEVFQGDLFE 116

Query: 294 EQAPGSLDLVLCNPPFHQQQVVGDFLAWRMFTQAKAALAKGGELWIV-GNRHLGYHLK-- 350
           +       +++ NPP       G  L  ++ ++    L + G +W+V   +H    L   
Sbjct: 117 KVNNKKYSVIISNPPIK----AGKELIHKIISKGHNLLNENGSIWVVIQTKHGAKSLTKY 172

Query: 351 LKRLFGNAEQVAATPKFVIIKA 372
           ++ +FGN E V  +  + ++K+
Sbjct: 173 MEEIFGNVETVTISGGYRVLKS 194