Pairwise Alignments

Query, 736 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  341 bits (875), Expect = 8e-98
 Identities = 194/438 (44%), Positives = 271/438 (61%), Gaps = 7/438 (1%)

Query: 285 DISARKAAEECLRHAARHDALTGLANRLHLDELLKE--VQQRPYGRAAALLFIDLDRFKL 342
           DI+ ++  E+ +   A  D LTGL NR  L + + +            ALLFIDLD FK 
Sbjct: 433 DITEKRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQCLAAAEREQETLALLFIDLDNFKT 492

Query: 343 INDSLGHGAGDQVLVEVAQRLLHCLRPGDHLARFGGDEFVALLGDLACEADAERVAQRML 402
           +NDSLGH  GD++L  VAQRL  C+R  D ++R GGDEFV +L D   +  A +VA++++
Sbjct: 493 VNDSLGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGDEFVVVLADAQLDG-ASQVARKII 551

Query: 403 VALREPLQLGERTLSVSASIGIAPLQRDGQAL-NVLQAADLALYRAKSAGKDQFALFCDG 461
             + +P  +    L+V+ SIGI+    D +   ++L+ AD A+Y+AK +G++ +  F   
Sbjct: 552 DRVGQPFVIDGHQLTVTPSIGISLFPHDARDFQSLLKNADTAMYQAKESGRNAYQFFTAE 611

Query: 462 LHSKAARQLELESALAQALTRREFTLHYQPICRVEQGQPYLLGVEALLRWRFEDKP-VAP 520
           ++  A  +L LE+AL QA+ R+EF LHYQP  +V+ G   ++G EAL+RW   +   V P
Sbjct: 612 MNVLAFERLVLENALRQAVERQEFVLHYQP--QVDMGSGRVIGAEALVRWLHPELGMVPP 669

Query: 521 MEFIPVLEESREIVRVGEWVLREACRQVRRWQQAGQTQLYCAVNLSIRQLQQVDFAELLA 580
             FIPV E+S  I  +G+WVL EACRQ R WQ+AG   +  AVNLS  QL+Q +  E +A
Sbjct: 670 ARFIPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGLPAIPVAVNLSAVQLRQSELHESVA 729

Query: 581 RVLRETGLPPQSLLLEITETLLMHDSEMMLNCLHEVAALGVRLALDDFGTGYCSLGYLKR 640
            +LR TGL  + L LE+TE  +M D+E  + CL  +  +GV L++DDFGTGY SL YLKR
Sbjct: 730 ELLRRTGLESRYLELELTERTVMEDAEATVRCLRRLDEMGVMLSIDDFGTGYSSLSYLKR 789

Query: 641 YPLHVLKVDRSFIAAAPDDADSVAISGAIIGLGQSLGLAVVAEGVERPEQIEFLVAQGCR 700
           +P+  LK+D+SF+     DAD  AI+ AII +G SL L V+AEGVE  EQ+E L   GC 
Sbjct: 790 FPIDKLKIDQSFVRDIVADADDQAIAVAIISMGHSLRLRVIAEGVETAEQLEILHRHGCD 849

Query: 701 AVQGYWFSPPRPAPELQA 718
             QG+ F  P PA E  A
Sbjct: 850 EAQGFHFGRPMPADEFAA 867



 Score = 42.7 bits (99), Expect = 8e-08
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 22/171 (12%)

Query: 138 DQHALYDSLLKIVFFDMILAIDTYSAAQRHALEDSEARLTRALRGSEDGIWEWDVERDQL 197
           +Q  L  +L  +V   +  A    S AQ H+LE+   R  R L     GI  +D E    
Sbjct: 172 EQRLLGVALANLVSLALEHAALRQSQAQLHSLEE---RYLRLLEFCPTGIIHYDTELHIT 228

Query: 198 HLSERWTAMLGMPMQAGYCSRGWFERVHPDDLPGLRE-----AIAAHLNGHSPSLAHEYR 252
           + ++++  ++G+P+          ER+   D+  L++     A+AA L G +     EYR
Sbjct: 229 YSNQQFANIIGVPL----------ERLQDLDMAKLQDQRPLPALAAVLEGRTGRFEGEYR 278

Query: 253 VRMETGEYLWVLVRGVAERCEQGTLRMAGSQ--TDISARKAAEECLRHAAR 301
             + +G  LWV +   A   +QG   + G     D + RK AE  LR  +R
Sbjct: 279 ASL-SGRQLWVSL-VAAPVLDQGGQLLGGIAIVEDATERKRAELQLRQLSR 327