Pairwise Alignments

Query, 663 a.a., Serine phosphatase RsbU, regulator of sigma subunit from Pseudomonas stutzeri RCH2

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score = 72.4 bits (176), Expect = 6e-17
 Identities = 96/431 (22%), Positives = 184/431 (42%), Gaps = 61/431 (14%)

Query: 4   LGLRGKSLLALLLSCLLAFALAGLIGREALLGV--QHRFGEAYARNVVQLNRERLFAPVS 61
           L ++ K LL + L+ +L+    GL+G+ +   V  Q   G      ++ +  E     VS
Sbjct: 6   LTIKQKILLTVSLAVILSTVAVGLLGQHSARDVVEQRMLGSEMPAKMLSIRNELEKDMVS 65

Query: 62  RELALAQRLAASQLTVAWLQ----AEDSPAKRDTFFKEAAGYQQAFGDHAYFAASASSNS 117
             L  A++LA S++   WL+    AED           A+ YQ A   +A       + +
Sbjct: 66  L-LNAAKQLADSRMLGKWLEQGRPAEDESRVVSQLQDVASQYQLAQASYA----DRETGA 120

Query: 118 YYSNGPGQEPSQAPRYLMSPDNPRDEWFYQTLQATAPYSINVDRSVVTGELKVWFNVQVR 177
           YY+             +++P+  +D WF+    +     +NV      G++K++ N Q  
Sbjct: 121 YYTQSGFLR-------ILTPE--QDGWFFDYRSSGVQQRLNVFTEA-NGDVKLFINYQQL 170

Query: 178 DGDRHLGLVGSGIGLRAFLDDFIESSKVGVESMVLDAYGSILVHPNQNLVTLNAETARGR 237
           +G    GL  S       LD  ++     + S  L+  G + +   +  V L+++  + R
Sbjct: 171 NGRGLAGLAKS-------LDAMVQR----LTSFKLEESGFVYLVDAKGEVQLHSDPGKIR 219

Query: 238 SLSTNVLGLLDDISAATAVRQAMADSREAPGTVSTLRVTLDGAPRLLALSWIPELQWFVA 297
             + N L                + S  +    + + V +DG P ++A S++P + W++ 
Sbjct: 220 KATLNSL-------------YGKSGSLLSRADFNYMEVEVDGQPMMVASSYLPSIDWYLV 266

Query: 298 SSVDLGTAQVVEVRPLLPAIGLFLVLFLLLIGGG----AWLVEKRVLKPLRQLRRGAQAL 353
           + V        EV  LL    L ++   LLI       +  V   V KP+  + R  + +
Sbjct: 267 AQV-----PEAEVFALLDEAALKILFSTLLIALAFVVLSGFVASSVSKPIAAVARMFRDI 321

Query: 354 AAGQYDV--ALPLGRKDEIGELSAAFGSMAQTVRSHTSELENRVRERTQELERANRDMA- 410
             G+ D+   LP+  +DE+ +L++ F S    ++    E    V + +++L ++  D++ 
Sbjct: 322 GEGEGDLRQRLPVQGEDELAQLASGFNSFISKIQDSVIE----VAQTSEQLGKSAIDVSR 377

Query: 411 AAHKKIDDSID 421
            A + ++DS D
Sbjct: 378 QAQQTLEDSQD 388