Pairwise Alignments

Query, 206 a.a., Site-specific recombinase XerC from Pseudomonas stutzeri RCH2

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas fluorescens FW300-N2E2

 Score = 42.7 bits (99), Expect = 7e-09
 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 16/156 (10%)

Query: 43  RDLALFDLAIDSKLRACDLTKLRVRDVAHGENLSSRAMVMQQKTQRPVQFEITEQTRSAL 102
           RD A+ +L   S LR  +LT L +  +    +L+   + +  K  +     +  + R AL
Sbjct: 132 RDQAMLELFYSSGLRLSELTGLNLDQL----DLADGMVQVLGKGSKTRLLPVGRKAREAL 187

Query: 103 AAWIHQAQLRS--EDCLFPSRLHTSDHLSTRQYARIVKGWVKAIG---LDPAMYGTHTMR 157
             W+    L +  +D +F S+         R   R ++  VKA G   L   ++  H +R
Sbjct: 188 EQWLPLRALSNPADDAVFVSQQ------GRRLGPRAIQLRVKAAGERELGQNLH-PHMLR 240

Query: 158 RTKASLIYRRTKNLRAVQLLLGHTKLESTVRYLGIE 193
            + AS +   +++LRAVQ LLGH+ +++T  Y  ++
Sbjct: 241 HSFASHLLESSQDLRAVQELLGHSDIKTTQIYTHLD 276