Pairwise Alignments

Query, 658 a.a., Type I restriction-modification system methyltransferase subunit from Pseudomonas stutzeri RCH2

Subject, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score =  422 bits (1084), Expect = e-122
 Identities = 282/797 (35%), Positives = 424/797 (53%), Gaps = 155/797 (19%)

Query: 1   MNTENHSQTAAFLWSIAD-LLRGDFKQSQYGRIILPFTLLRRMECVLAPTKDEVIKQTFA 59
           M+   H++  +F+WSIAD  LR  + + +Y  +ILP  +LRR++ +L P+K+ V+++   
Sbjct: 1   MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRF 60

Query: 60  QEGRPDTVR--EMILLRAAGQQFFNASPLTLGTLSDTQT------AADLMSYVQAFSKDA 111
           Q+   + +   +  L   +G  F+N S  TL TL  T T       A+   Y+  FS++ 
Sbjct: 61  QKEEMNEIELDDAPLCATSGYVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENV 120

Query: 112 REIFEHFHFEDFVQQLETANLLYQVVQRFAAT--DLSPEF-----------ISNFGMGII 158
           +EI E F+ +  ++ +   ++L  VV++F +   +L+P             +SN GMG +
Sbjct: 121 KEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAVKEDPEGNKLPALSNLGMGYV 180

Query: 159 FEELIRKFAESSNETAGEHFTPRDIVHLTTSLVITNQDHKLTPNSIVTIYDPTAGTGGFL 218
           FEELIRKF E +NE AGEHFTPR+++ L T LV       L P SI T+YDP  G+GG L
Sbjct: 181 FEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNL-PLSI-TVYDPACGSGGML 238

Query: 219 SEGDEYIQSI--SEKVSVSLHGQELNPESYAICKADMLIKGQDVASIKLGNTLSNDQLAD 276
           +E   +++    +    + L+G+E+N E+YAICK+DM+IKG +  +I++G+TLS D+ + 
Sbjct: 239 TETQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSS 298

Query: 277 KRFDFMLSNPPFGVEWKKVQKQITDEHSHKGFDGRFG-------------PGLPRVSDGS 323
            RFDFMLSNPP+G  W   QK I +    +  DGRF                +PR SDG 
Sbjct: 299 NRFDFMLSNPPYGKSWASEQKHIKE--GKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQ 356

Query: 324 LLFLLHLVSKMRDPRDG--GSRIGIILNGSPLFTGGAGSGESEIRRYLLQNDLVEAIVAL 381
           LLFL+ +V+KM+ P+D   GSRI  + NGS LFTG AGSGES IRR++++ND+++AIV L
Sbjct: 357 LLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRFIIENDMLDAIVQL 416

Query: 382 PTDMFYNTGIATYVWILSNHKAAARQGKVQLIDGSQHYAKMRKSLGSKRQYITEDQISEL 441
           P ++FYNTGI TY+W+L+N+K   RQGKVQLID S  + K+RK+LG+K    + + I+E+
Sbjct: 417 PNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEI 476

Query: 442 VRLY---GSFEQTAQSK---------IFPIEAFGYRRITVERPLRLNFQTSPERI----- 484
           V  Y    S E+    K         +F  + FGY ++ +ERP R N Q   + I     
Sbjct: 477 VSTYLENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRF 536

Query: 485 ----GKVLE-------------------EKAIVKLGSDGWQPIQRALKS--MD------- 512
                +V+E                   EK I K   +    + +A K+  +D       
Sbjct: 537 ENSQREVMEYLYAEYGEQVYDAGFVKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQ 596

Query: 513 ------ASVLHR--------NREQFSKLLKKALTAHSVSLSTPELKALMSALSERDPEAD 558
                 AS LH+        +  QF +L+   LT+  + LS PE KA++ A+S  D  A+
Sbjct: 597 RTLVNVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPEKKAILDAVSWYDENAE 656

Query: 559 ---------------------ICMTKGQP----------------EADAGLRDNENVPLG 581
                                 C  +  P                E+ + LRD+E+VPL 
Sbjct: 657 KVIKKVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLE 716

Query: 582 ESVYDYFQREVIPHVPDAWIDESKTDAQDGEVGIVGFEIPFNRHFYVFQPPRPLAEIDSD 641
           +S+Y YF  EV PHV +AWI+             +G+EI FN++FY  +P R + E+  D
Sbjct: 717 QSIYQYFLDEVKPHVDEAWINLESVK--------IGYEISFNKYFYRHKPLRSMDEVAGD 768

Query: 642 LKACTDRIKQMIEGLSA 658
           + A    ++Q  EGL A
Sbjct: 769 IIA----LEQKAEGLIA 781