Pairwise Alignments

Query, 453 a.a., DNA repair protein RadA from Pseudomonas stutzeri RCH2

Subject, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

 Score =  401 bits (1030), Expect = e-116
 Identities = 217/426 (50%), Positives = 282/426 (66%), Gaps = 3/426 (0%)

Query: 1   MAKAKRMYGCTECGSTFPKWAGQCGDCGAWNTLVETVIEGAAPPSGRAGWAGEQANIRTL 60
           MAK    + C  CG+ +P+W G+C  CG WN++ E     A P     G  G++ +  +L
Sbjct: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAEALPKGQTGGRGGQRLSFVSL 60

Query: 61  AEVSVEEVPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCAIAQHYP-A 119
             V     PR  T   ELDRV GGGLV GS +LIGGDPGIGKST+LLQ +  +A+    +
Sbjct: 61  EGVGAPP-PRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAGLARGGARS 119

Query: 120 LYVTGEESQQQVAMRARRLDLPQDKLKVMTETCIESIIATARL-EKPKVMVIDSIQTIFT 178
           +Y++GEE+  QV +RA RL L +  + +   T +  I+AT    E P V+VIDSIQT++ 
Sbjct: 120 VYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVIDSIQTMYL 179

Query: 179 EQLQSAPGGVAQVRESAALLVRFAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE 238
           + L SAPG VAQVR  +  L+R AK+ G  +FLVGHVTKEG +AGPRV+EHMVD V+YFE
Sbjct: 180 DTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHMVDAVIYFE 239

Query: 239 GESDGRLRLLRAVKNRFGAINELGVFGMTDKGLKEVTNPSAIFLTRAQEAVPGSVVMATW 298
           GE     R+LRAVKNRFGA +E+GVF M+D GL EV NPSA+FL   +  V GS V A  
Sbjct: 240 GERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVTGSCVFAGM 299

Query: 299 EGTRPMLVEVQALVDTSHLANPRRVTLGLDQNRLAMLLAVLHRHGSIPTYDQDVFINVVG 358
           EGTRPMLVE+QALV  S   + RR  +G D  RLAM++AVL     +     DV++NV G
Sbjct: 300 EGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGNDVYLNVAG 359

Query: 359 GVKVLETAADLALMAAVISSLRNRPLDTDLLVFGEVGLSGEIRPVPSGQERLKEAAKHGF 418
           G+++ E AADLA+ AA++SS    P+  D++VFGE+GLSGEIR V  G  RLKEAAK GF
Sbjct: 360 GLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRLKEAAKLGF 419

Query: 419 KRAIVP 424
            +A++P
Sbjct: 420 DQALMP 425