Pairwise Alignments

Query, 813 a.a., Predicted ATP-dependent protease from Pseudomonas stutzeri RCH2

Subject, 660 a.a., ATP-dependent protease-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  395 bits (1014), Expect = e-114
 Identities = 212/479 (44%), Positives = 301/479 (62%), Gaps = 3/479 (0%)

Query: 309 VVGHPVDGGAPVVFEPHPTYDNLFGRIEYNTDQGALYTSYRQLRPGALHRANGGFLMLEA 368
           +V H    GAP++ E +PT   L G +E+    GA   S   +RPGAL RANGGFL+L+A
Sbjct: 168 LVSHAPGAGAPIIREDNPTRAALSGWVEHVAAPGAPVVSL--IRPGALQRANGGFLLLDA 225

Query: 369 EKLLSEPFVWEALKRALQSRKLKMESPLAE-LGRLATVTLTPQVIPLHVKVIIIGSRQLY 427
            K+L+ P  WE LK +L+  ++++ +     LG +A  T  P  +PL +KV++ G   LY
Sbjct: 226 HKVLTTPGAWEDLKHSLRHGQIRVVTEAERALGAVAAPTPEPSPLPLALKVVLFGEPDLY 285

Query: 428 YTLQDLDPDFQEMFRVLVDFDEDIPLAEDSLEQFAQLMKTRTSEEGMAPLTAAAVARLAT 487
           Y L D DP+F  +F+V  DFD+ +    +++   A+++      E + PL   AVAR+  
Sbjct: 286 YDLWDSDPEFAALFKVAADFDDQMKRTPEAVLGLARVLAEGGRAEDLPPLDRGAVARIVD 345

Query: 488 YSARLAEHQGRLSARIGDLFQLVSEADFIRQLAKDEVTDAGHIERALKAKATRTGRVSAR 547
            + RLAE   +L+AR+  L  L  EA F  +     V    H+ERAL A+  R GRV   
Sbjct: 346 RAVRLAEDTDKLTARMEPLIDLAREAGFFARQDGAGVIGRDHVERALTAQERREGRVRDL 405

Query: 548 ILEDILAGVILIDSEGAAIGKCNGLTVLEVGDSAFGMPARISATVYPGGSGIVDIEREVN 607
           +LE+IL G I +++ GA +G+ NGL VL+ G ++FG P+RI+  V  G   + DIEREV+
Sbjct: 406 LLEEILDGTIRVETTGAVVGQINGLAVLDYGRASFGRPSRITCAVRVGRGEVTDIEREVD 465

Query: 608 LGQPIHSKGVMILTGYLGSRYAQEFPLEISASIALEQSYGYVDGDSASLGECCALISALS 667
           LG P+HSKGV+IL+ +L +R++ +  L ++AS+  EQSY  VDGDSAS  E  AL+SAL+
Sbjct: 466 LGGPLHSKGVLILSAFLSTRFSVDGLLNLAASLVFEQSYCEVDGDSASSPELYALLSALA 525

Query: 668 RTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGVIIPFANVTTLML 727
             P++Q  A+TGS++QFG +Q +GGVNEKIEGFF +C ARGLTG+QGV+IP AN+  LML
Sbjct: 526 EAPIRQSLAVTGSVDQFGNIQPIGGVNEKIEGFFEVCAARGLTGDQGVLIPRANLRNLML 585

Query: 728 DERVLEAVRQQRFHVYAVKQVDEALSLLVGEDVGAANDQGHFPKGSVNARVVERLRDIA 786
            + V+EA     FHVY +  VDE +++L G   G     G FP+GS+N RV  RL   A
Sbjct: 586 RDEVVEACDTGLFHVYPIATVDEGIAILTGLIPGERGRDGGFPEGSLNRRVARRLESFA 644



 Score = 93.6 bits (231), Expect = 3e-23
 Identities = 50/125 (40%), Positives = 71/125 (56%)

Query: 11  LAPDALTRPFEPSQFNFNTTAELEPFLGVLGQERAVEALQFGVAMPRPGYNVYVMGEPGT 70
           L   AL RP +P+   F TTA+L    G LGQERA+EA+ F +AM  PGYN++ MG  GT
Sbjct: 6   LGAPALRRPCDPAGLPFETTADLTAPKGPLGQERALEAVAFALAMAAPGYNLFCMGPEGT 65

Query: 71  GRFSFVRRYLKAEGKRLDTPSDWVYVNNFDEPREPRVLELPNGGAGAFIADINQLIDNLL 130
           G+ +     L    ++  TP DWV +++  +P  P  L LP G A  F+A ++ L  +  
Sbjct: 66  GKRALTGALLAEAARQKPTPDDWVILHDPADPLRPTPLRLPAGRAKGFLAAVDALATDWT 125

Query: 131 ATFPA 135
           A + A
Sbjct: 126 AEWSA 130