Pairwise Alignments

Query, 457 a.a., putative efflux protein, MATE family from Pseudomonas stutzeri RCH2

Subject, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 90.9 bits (224), Expect = 8e-23
 Identities = 105/428 (24%), Positives = 185/428 (43%), Gaps = 26/428 (6%)

Query: 23  PMILSNLSVPLVALVDSSVIGHLPHAHQLGAVAVGGSLYTLLVWVMGFLRMGTTGFAAQA 82
           P + + L   L  +VD   IGH   A  L  + V   +   ++ +   + +GT   A+  
Sbjct: 16  PTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVGVGTGALASIK 75

Query: 83  AGRNDGGALRQILLQGLLLALGFALLLGAIGVPLKGAALQLMQPSAELDELTRDYFHTRL 142
            G     + ++IL  GL+  L  A ++  I   +    L+       + EL   Y    +
Sbjct: 76  QGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFELGLQYLQVLI 135

Query: 143 FGLPAALASYALIGWFLGTQNARAPLAILLTTNLINVVLDLWFVLGLDWGVAGAARASVI 202
            G    L S A+        +      +++   L N+ LD  F+  L W + GAA A+ +
Sbjct: 136 VGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELTGAAIATTL 195

Query: 203 AEWSGALLGLALTRKALARYPGRLDTRALR-RWLSWRPLMAVN-RDIFLRSLALQLVFLL 260
           A+    LLGLA    A A    RL  R LR  W S   + A+     F+ +    +V L 
Sbjct: 196 AQVVVTLLGLAYFFSARANM--RLTRRCLRLEWHSLPKIFAIGVSSFFMYAYGSTMVALH 253

Query: 261 VTVQGTRLGDATVAANALLLNGLLLTAHAL--DGLAHAVEALAGHAIGARNRDALQRVMV 318
            T+     G+A V   A  + G ++T + L  +G+A+ ++ LA +  GARN D +++++ 
Sbjct: 254 NTLM-IEYGNA-VMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNYDHIRKLLR 311

Query: 319 VAGGWSLLASVAFGLFFLLGGQLFIQL--QTDIPEVRQTALTYLPYLAALPLIAVWSYLL 376
           +A G ++L  +AF L   L  +  I +   +D   +    +    +L A+         L
Sbjct: 312 LAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLFAM--------YL 363

Query: 377 DGLFIGATRAREMRN----SMLLAVG---LTLPLGWLL-QGLGNHGLWLAFLSFMLMRGV 428
           DG  + +    +  N    +M + VG   + LP  ++L Q  G  G+W+A     ++   
Sbjct: 364 DGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTGVWIALPISNIVLST 423

Query: 429 CLGVLAQR 436
            +G++  R
Sbjct: 424 VVGIMLWR 431