Pairwise Alignments

Query, 317 a.a., rod shape-determining protein MreC from Pseudomonas stutzeri RCH2

Subject, 355 a.a., rod shape-determining protein MreC (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  224 bits (572), Expect = 2e-63
 Identities = 130/325 (40%), Positives = 191/325 (58%), Gaps = 16/325 (4%)

Query: 2   RLLVFVVLCVVLMVVDARFDALKTVRSQMGLVLTPFYWVADMPVRIWRGATEQIASSNSL 61
           RL + ++L V+L+  + R   L+  R  +   L+P  ++A +P  I   ++E  A+ N L
Sbjct: 14  RLTLAIILSVILLAANHR---LEPARESLSSALSPIQYLASVPSAILDWSSESFATRNML 70

Query: 62  MAENEKLKAEALLMQRRLQKLAMLTEQNVRLRELLNSAALVDDKVIVAELIGLDPNPFTH 121
             +N++L  + LLM  RLQ+   L ++N RLR LL S A  D + +V E++ +   P  H
Sbjct: 71  ALQNKELLRQQLLMSERLQRFEHLRQENERLRALLGSPAYQDSRKMVVEVMEVASEPSHH 130

Query: 122 RILIDKGEKDGVFMGQPVLDASGLMGQVVEVLPYAARVLLLTDVTHSIPVQLNRNGLRAI 181
            +++++G + GVF+GQPV+DA G++GQVV+V    +RVLL++DV+H +PV++ RN +R I
Sbjct: 131 YVVLNRGSRSGVFVGQPVVDAQGVVGQVVQVSEMTSRVLLVSDVSHGLPVRITRNDVRLI 190

Query: 182 AVGTGNPDYLELRHVAETADVKAGDLLVSSGLGQRFPSGYPVAQVTEVVHGSGQPFAIVR 241
           A GTG  D +ELRHVA++ D++ GDLLV+SGLG RFP GYPVA+V +V    GQ +  V 
Sbjct: 191 ANGTGELDEIELRHVAKSTDIRVGDLLVTSGLGNRFPEGYPVARVMKVFTEDGQSYTRVT 250

Query: 242 AVPTAMLNRSRYLMLVF----SDSRTPEERAAAAA-----EAQADADQKAAAEGGEASAA 292
           A P A L+R RYL+L++    S    P +    AA     EA+ DA   A    GEA   
Sbjct: 251 AQPLAALDRIRYLLLIWPSPDSGVTLPNQIPVPAADHPVEEAKPDAVNGAINPQGEAQGT 310

Query: 293 PGTAETGAAP----PAAETPAVPAA 313
             T      P    P A  P   AA
Sbjct: 311 NATVPNATVPNTTAPNATVPNATAA 335