Pairwise Alignments

Query, 485 a.a., ribonuclease, Rne/Rng family from Pseudomonas stutzeri RCH2

Subject, 1052 a.a., ribonuclease E from Vibrio cholerae E7946 ATCC 55056

 Score =  271 bits (693), Expect = 8e-77
 Identities = 159/466 (34%), Positives = 263/466 (56%), Gaps = 13/466 (2%)

Query: 3   EEILMNITPMES-RVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVDIG 61
           + +L+N T  E  RVA+V+   L ++ +E         NIYKG++ R+ P ++AAFVD G
Sbjct: 2   KRMLINATQKEELRVALVDGQRLFDLDIESPGHESKKANIYKGRITRIEPSLEAAFVDYG 61

Query: 62  LDRAAFIHASEISAR---EGNAVEP---INALVHEGQSLVVQVTKDPIGTKGARLTTQLS 115
            +R  F+   EI+     +G + +    I  +++EGQ ++VQ+ K+  G+KGA LTT +S
Sbjct: 62  AERHGFLPLKEIAREYFPDGYSYQGRPNIKDVLNEGQEVIVQIEKEERGSKGAALTTFIS 121

Query: 116 IPSRYLVYMPRTSHVG-ISLRIEDEAERERLKQIVAECVAAEGIQEAGGFILRTAAEGAG 174
           +   YLV MP     G IS RIE + ER  LK  ++     +G+    G I+RTA  G  
Sbjct: 122 LAGSYLVLMPNNPRAGGISRRIEGD-ERTELKSALSSLELPQGM----GLIVRTAGVGKS 176

Query: 175 SDEILMDIRYLRRLWEQIASQIKTVEAPMVIYEDLSLAMRTLRDLVNPRIEKIRIDSREN 234
           ++E+  D+  L + W  I     +  AP +I+++ ++ +R +RD +   I +I IDS   
Sbjct: 177 AEELEWDLNVLLKHWSAIKQASDSNPAPFLIHQESNVIVRAIRDYLRRDIGEILIDSNSI 236

Query: 235 FQKVTQFVGELMPELGDRLEHYPGERPIFDLYGVEDEIQKALERKVMLKSGGYLIIDPAE 294
           +++  + +  + P+  +R++ Y GE P+F  + +E +I+ A +R+V L SGG ++IDP E
Sbjct: 237 YERALEHIRLVRPDFVNRVKKYEGEVPLFSHFQIESQIESAFQREVRLPSGGSIVIDPTE 296

Query: 295 AMTTIDVNTGAFVGHRTLEETIFKTNLESATAIARQLRLRNLGGIIIIDFIDMEDEEHRR 354
           A+T+ID+N+        +EET   TNLE+A  IARQLRLR+LGG+++IDFIDM    H+R
Sbjct: 297 ALTSIDINSARATKGGDIEETALNTNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQR 356

Query: 355 QVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCMCCQGRGKLKTPE 414
           +V   L + +  D A+  I  I+  GL++M+R+R   SL +     C  C+G G ++  E
Sbjct: 357 EVENRLREAVRVDRARVQIGRISRFGLLEMSRQRLSPSLAEASHHICPRCKGTGVIRDNE 416

Query: 415 TVCYEIFREILREARAYQAEGYRVLANQKVIDRLLDEESGNVADLE 460
           ++   + R I  EA          +    +   LL+E+  ++  +E
Sbjct: 417 SLALSVLRLIEEEALKDNTSQVLAVVPVSIASYLLNEKRRSINHIE 462