Pairwise Alignments

Query, 241 a.a., ABC-type (unclassified) transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

 Score =  303 bits (777), Expect = 2e-87
 Identities = 149/239 (62%), Positives = 187/239 (78%)

Query: 3   VLKAQHLAKSYKSRQVVRDVSLSIESGQIVGLLGPNGAGKTTCFYMIVGLVNADQGRVLI 62
           +L A  L K YK R+VV++  L++E+G++VGLLGPNGAGKTTCFYMIVGLV AD GR+ +
Sbjct: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60

Query: 63  DQNDVTHLPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRSGRQQALEGLL 122
           D  D+T  PM+ RA+ G+GYLPQE S+FRKLSVADNI  +LE R DLD  G+++ L  LL
Sbjct: 61  DGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLL 120

Query: 123 QEFHINHIRDSLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHH 182
           +E  I H+ D LG SLSGGERRR EIARALA  P+ +LLDEPFAGVDPISVG+I++I+ H
Sbjct: 121 EELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIH 180

Query: 183 LKAKGIGVLITDHNVRETLDICETAYIVNDGQLIAEGDAQTILSNQLVKEVYLGHEFRL 241
           LK +GIGVLITDHNVRETL IC+ AYI+ +G ++A+G    +L+N  V+ VYLG  FRL
Sbjct: 181 LKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239