Pairwise Alignments

Query, 138 a.a., prepilin-type N-terminal cleavage/methylation domain from Pseudomonas stutzeri RCH2

Subject, 139 a.a., Type IV pilin PilA from Pseudomonas fluorescens FW300-N2E2

 Score = 94.4 bits (233), Expect = 6e-25
 Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 9/134 (6%)

Query: 7   GFSLIELMTALSIIGILAAIAFPAYQNYTVRSTAAAALAEITPAKAAFEHAISENRTPSL 66
           GF+LIEL+  ++IIGILA  A P Y  Y  R+ A A LAE++  K  FE  +++   PSL
Sbjct: 6   GFTLIELLIVVAIIGILATFALPQYSKYQARAKATAGLAEVSALKVPFEDVMNQGTNPSL 65

Query: 67  VSSLPGFIGIGASTNYCTVTLIAAA---TGSITCTARNGMPGRFNGKIITLNRTAEGLWS 123
            +     IG  + T+ CT+T    A    G+I CT  N  P    GK ITL R+ +G+W+
Sbjct: 66  AN-----IGGTSPTSNCTLTASGTAADGAGTIACTLLNA-PAPVLGKAITLTRSTQGVWT 119

Query: 124 CTSDLDSQYKPGKC 137
           C S    ++ P  C
Sbjct: 120 CGSTAAQEFLPAGC 133