Pairwise Alignments

Query, 487 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Pseudomonas stutzeri RCH2

Subject, 497 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Synechococcus elongatus PCC 7942

 Score =  385 bits (990), Expect = e-111
 Identities = 220/483 (45%), Positives = 294/483 (60%), Gaps = 7/483 (1%)

Query: 4   PLNHLLPQ-AGSDVLIRELTLDSRKVRGGDLFLAVPGLQFDGRDHAQDAIARGAAAVAYE 62
           P   L PQ A  D+ I  L  DSR+ + GDLFL +PG Q DG     +AIA GA AV   
Sbjct: 11  PTQVLQPQHAALDLAITGLQTDSRRCQPGDLFLGMPGTQVDGGQFWPEAIAAGAVAVIVT 70

Query: 63  AEGLVQ-PLVG--EAVMVPVQHLASQLSAIAGRFYGEPSRNMRLVGVTGTNGKTSVSQLI 119
              L Q PL    EA ++    +     AIA  FY +P++ ++L+GVTGTNGKT+ + L+
Sbjct: 71  PTALAQRPLSANPEACLILSDQMPVTAGAIAAAFYNQPAQTLKLIGVTGTNGKTTTTHLV 130

Query: 120 AQALDRLGEPCGIIGTLGTGFHGQLELGRHTTPDAIGVQATLANLKQEGARAVAMEVSSH 179
              L+       ++GTL   + G  E+ +HTTP A  +QA LA     G +A  MEVSSH
Sbjct: 131 EHFLNAADTKTALLGTLYNRWPGYSEVAQHTTPFATDLQAQLATAVDAGCQAAVMEVSSH 190

Query: 180 GLDQGRVAALDFDVAVFTNLSRDHLDYHGTMEAYGAAKARLFNVPGLRCR-VINLDDGFG 238
            LDQGRV    FDVAVFTNL++DHLDYHGTMEAY AAKARLF  P LR + VIN DD +G
Sbjct: 191 ALDQGRVNGCGFDVAVFTNLTQDHLDYHGTMEAYFAAKARLFAPPYLRGKAVINADDAYG 250

Query: 239 RALAGEDRESRLITYSLEDPSAYLYCAEARLDDDGIHARLITPQGERSMRSPLLGRFNVS 298
           + L       + +TYS+   +A     + +    G+   + TP G    RSPL+G+FN++
Sbjct: 251 QRLITMTPPGQCLTYSVVG-TADFCTTDLQYGPTGVEGTIKTPDGAFPFRSPLVGQFNLA 309

Query: 299 NVLAAVGALLGMDYALDEILAVLPELEGPAGRMQRLGGGD-HPLIVVDYAHTPDALEKVL 357
           N+L A+ A   +   ++ +LAV+P+  G  GRM+R+ G D  P ++VDYAHTPD+LE +L
Sbjct: 310 NLLGAIAAGWTLGLPIETMLAVVPDFVGVPGRMERVVGQDSDPTVIVDYAHTPDSLENLL 369

Query: 358 TALRPHARGRLLCLFGCGGDRDTGKRPLMAEVAERLADGIVVTDDNPRNEAPERIVEDIR 417
            A RP  +G L+C+FGCGGDRD  KRPLM E+A RLAD +++T DNPR E P +I+ DI 
Sbjct: 370 KAARPFIQGELICVFGCGGDRDRTKRPLMGEIAARLADRVIITSDNPRTEDPRQILADIV 429

Query: 418 SGFVNPAAATFAHGRAQAIAGLIATAHAEDVVVLAGKGHEDYQEIRGERLPFSDIEEACK 477
           +G    +       RA AI   I +A   D V+LAGKGHEDYQ +   ++ F D E+A  
Sbjct: 430 AGIPAASPVVVEADRAAAIRQAILSAQPGDGVLLAGKGHEDYQILGTTKIHFDDREQARL 489

Query: 478 ALS 480
           AL+
Sbjct: 490 ALA 492