Pairwise Alignments

Query, 458 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase from Pseudomonas stutzeri RCH2

Subject, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 31/334 (9%)

Query: 103 PVAAITGSSGKTSVKEMLASILRSAYGQNAVLATRGNLNNDLGAPLTLLELCDEHRAAVI 162
           PV AITGS+GK++V + L+ +L +A G  A  A  GN+    G P   L +  +    V+
Sbjct: 113 PVIAITGSNGKSTVTD-LSGVLANAAGVKA--AVGGNI----GVPALDL-ISPDVELYVL 164

Query: 163 ELGASRPGDIAYTVKLVRPDVSLITNAGSAHVGEFGGPHKIVEAKGEILDGLSESGIAVL 222
           EL + +      T   ++   +   N    H+  + G     +AK  I D    +  AV+
Sbjct: 165 ELSSFQ----LETTSSLKLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIFD---HAETAVV 217

Query: 223 NRDD-KAYPIWAERVAGKRIVSFGLDNPLADFSAGSIAYDQRGCPSFVLTGPLGNLRIQL 281
           N DD + +P   +  A  ++V+FG++   A FS        +G               +L
Sbjct: 218 NADDTQTFP---DHAAHLQVVTFGVEQA-AQFSLAQ----HQGREYLFARDEAVMACAEL 269

Query: 282 NLLGRHNVANALAAAAAAYALGVDADAVVAGLQQLQPVKGRAVAQMLANGVRLIDDSYNA 341
           +L+GRHNVAN L   A   + GV+    +  L+    +  R       +G++ ++DS   
Sbjct: 270 SLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQVVADNHGIKWVNDSKAT 329

Query: 342 NPASICAAIDVLASFAGRTILVLGDMGELGEWAEQGHREVGAYAVGKVDTLYAVGPLMAH 401
           N AS  AA+  L    G+  L++G +G+  ++         A  +  +        +  H
Sbjct: 330 NVASTLAALSGL-KIEGQLYLLVGGVGKGADFTPL------APVLATLPVQLCCFGVDGH 382

Query: 402 AVQAFGPGARHFADQASLIDSLRAEQGSGTTILI 435
                 P AR +    S+I S+R +  SG  +L+
Sbjct: 383 QFMPLHPSARFYDSMESIIRSIRPQLKSGDMVLL 416