Pairwise Alignments

Query, 253 a.a., Predicted membrane protein from Pseudomonas stutzeri RCH2

Subject, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (472), Expect = 4e-52
 Identities = 86/241 (35%), Positives = 148/241 (61%)

Query: 13  ELARTWRTLLQSIATPVISTSLYFVVFGSAIGARMEAMHGIPYGAFIIPGLIMMALLSES 72
           E+ R  R  +Q++  P I+ +LYF++FG+ IG+R+  M+G  Y  +I+PGLIMM++++ S
Sbjct: 16  EINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPGLIMMSVITNS 75

Query: 73  ISNASFGIYMPRYSGTIYEVLSAPVSYVEIVIGYVGAAATKSLVLGVIILITARLFVDYQ 132
            SN +   +  ++   I E+L APV    I+ GYV     + L++G ++   + LFVD Q
Sbjct: 76  YSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVTAVSLLFVDLQ 135

Query: 133 IQHPLMMALFLVLTAITFCLFGFIIGIWADGWEKLQIVPALIVTPLAFLGGSFYSIEMLP 192
           + H  ++   + LT++ F L G I  ++A  ++ + IVP  ++TPL +LGG FYSI +LP
Sbjct: 136 VDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGVFYSISLLP 195

Query: 193 PLWQKITLFNPVVYLISGFRWSFYGVSDISVGISLAMILGFLAACLLAVWWIFKTGYRLK 252
             WQ ++  NP+VY+++ FR+ F GVSD+ +  S A+++ F+ A      ++   G  L+
Sbjct: 196 EFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCVAHYLVTKGKGLR 255

Query: 253 N 253
           +
Sbjct: 256 S 256