Pairwise Alignments

Query, 253 a.a., Predicted membrane protein from Pseudomonas stutzeri RCH2

Subject, 262 a.a., NodJ ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 73.6 bits (179), Expect = 4e-18
 Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 13/228 (5%)

Query: 20  TLLQSIATPVISTSLYFVVFGSAIGARMEAMHGIPYGAFIIPGLIMMALLSESISNASFG 79
           ++L ++A P+I    Y    G+ +G  +  + G+ Y AF+  G++  + ++ S     + 
Sbjct: 34  SILGNLADPLI----YLFGLGAGLGMMVGRVDGVSYIAFLSAGMVATSAMTASTFETIYA 89

Query: 80  IYMPRYSGTIYE-VLSAPVSYVEIVIGYVGAAATKSLVLGVIILITARLFVDYQIQHPLM 138
            +    +   +E +L   V+  +IV+G +  AATK+ + G  I + A   + Y     L+
Sbjct: 90  TFARMRAQRTWEAILHTQVTIGDIVLGELAWAATKASLAGTGIGVVAAT-LGYTEWVSLL 148

Query: 139 MAL-FLVLTAITFCLFGFIIGIWADGWEKLQIVPALIVTPLAFLGGSFYSIEMLPPLWQK 197
            AL  + LT + F     I+   A  +E       L++TP+ FL G+ + +  LP  +Q 
Sbjct: 149 YALPVIALTGLAFASLAMIVTALAPSYEYFIFYQTLVITPMLFLSGAVFPVNQLPGAFQH 208

Query: 198 ITLFNPVVYLISGFRWSFYGVSDISVGISL------AMILGFLAACLL 239
           +T   P+ + I   R    G   + VG+ +      A++  FL+  LL
Sbjct: 209 VTRILPLAHSIDVIRPIMLGSPLVHVGLHIGALCCYAVVPFFLSTALL 256