Pairwise Alignments

Query, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  293 bits (749), Expect = 2e-83
 Identities = 158/352 (44%), Positives = 226/352 (64%)

Query: 358 MLVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNELGQIA 417
           +++IG +    G    W I++ ITRP+ +    L++I++GEGDLT+R+ + S++E+ Q+A
Sbjct: 283 LIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRRIEVKSKDEIAQLA 342

Query: 418 AGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATAVHEMT 477
             FN F  ++   +++V  S   ++ ++E  + I   T +  + Q  E E VATA++EM 
Sbjct: 343 LAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNEMA 402

Query: 478 ATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTLARDSE 537
           AT Q+VA NAT AA+AA +A  +   G+ +V+   +TI+ LA EI  A   +  L R++ 
Sbjct: 403 ATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERNTA 462

Query: 538 NIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATGEIQQ 597
            ID++LV IR+IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ +T EIQQ
Sbjct: 463 QIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEIQQ 522

Query: 598 MIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIASAAEE 657
           MI+ LQ   +  V  M  S   T+  V     A EAL+AITQAVS I+ MN QIASAA E
Sbjct: 523 MIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAANE 582

Query: 658 QSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709
           Q AV+ +IN+NV NI  +       A + ++A   L +L+ +   L+ QFR+
Sbjct: 583 QCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634