Pairwise Alignments

Query, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  294 bits (753), Expect = 8e-84
 Identities = 161/362 (44%), Positives = 235/362 (64%), Gaps = 1/362 (0%)

Query: 349 EESRSNLAAMLV-IGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNI 407
           E++ S++   L+ IG++    G    W I++ ITRP+ +    L++I++GEGDLT+R+ +
Sbjct: 273 EQAMSDIRLKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRRIEV 332

Query: 408 DSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIE 467
            S++E+ Q+A  FN F  ++   +++V  S   ++ ++E  + I   T +    Q  E E
Sbjct: 333 KSKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHLETE 392

Query: 468 LVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVD 527
            VATA++EM AT Q+VA NAT AA+AA +A  +  QG+ +V+   +TI+ LA EI +A +
Sbjct: 393 QVATAMNEMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQAAN 452

Query: 528 VVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQK 587
            +  L R++  ID++LV IR+IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +
Sbjct: 453 AINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR 512

Query: 588 TQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDM 647
           TQ +T EIQQMI+ LQ   +  V  M  S   T+  V     A  AL+AITQAVS I+ M
Sbjct: 513 TQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTISQM 572

Query: 648 NNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQF 707
           N QIASAA EQ AV+ +IN+NV NI  +A      A + ++A   L +L+ +   L++QF
Sbjct: 573 NIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTLLSQF 632

Query: 708 RV 709
           ++
Sbjct: 633 KI 634