Pairwise Alignments

Query, 605 a.a., Superfamily II DNA and RNA helicases from Pseudomonas stutzeri RCH2

Subject, 496 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

 Score =  389 bits (999), Expect = e-112
 Identities = 217/460 (47%), Positives = 293/460 (63%), Gaps = 18/460 (3%)

Query: 1   MSFASLGLSEALAGAVEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPVL 60
           ++F S GL   +  A+   GYT+PTP+Q++AIP VL G+D+M AAQTGTGKT GFALP++
Sbjct: 13  ITFDSFGLDARIQRALSEQGYTKPTPIQEQAIPVVLLGKDVMGAAQTGTGKTAGFALPII 72

Query: 61  ELLFPGGHPDREHRYGPKQPRVLVLTPTRELAAQVHESFKVYARDLPLKSTCIFGGVGMN 120
           + L P           P   R L+LTPTRELA QV+++   YAR   L+ST +FGGV MN
Sbjct: 73  QRLLPLASASASPARHPV--RALMLTPTRELADQVYDNVARYARFTDLRSTVVFGGVDMN 130

Query: 121 PQIQAVAKGLDVLVACPGRLLDLANQKAIDLSHVEILVLDEADRMLDMGFIHDVKKVLAK 180
           PQ +A+ +G+++LVA PGRLLD   QK+++LS V++LVLDEADRMLDMGF+ D+++++  
Sbjct: 131 PQTEALRRGVEILVATPGRLLDHVQQKSVNLSQVQMLVLDEADRMLDMGFLPDLQRIINL 190

Query: 181 LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRMFRVAASHKRALL 240
           LPA+RQ LLFSATFS +I  LA   L  P  IEV   N+  E + Q +F+V   HK+A +
Sbjct: 191 LPAQRQTLLFSATFSSEIKRLAASYLRQPVTIEVARSNSANENVRQTVFQVEDGHKQAAV 250

Query: 241 AHLI----TQGAWEQVLVFTRTKHGANRLAEYLEKHGLPAAAIHGNKSQNARTKALADFK 296
            HL+     +G   Q +VF  +K G +RLA +LE+ G+ AAAIHG+K+Q  R + L  FK
Sbjct: 251 VHLLKKRAAEGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQTLDGFK 310

Query: 297 ANQVRILVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPD 356
              +  LVATD+AARGLDI  +P V+NF+LP   EDYVHRIGRTGRAG SG+A+S+  P 
Sbjct: 311 QGNIDALVATDVAARGLDIPDMPCVINFDLPFSAEDYVHRIGRTGRAGASGDALSIYVPA 370

Query: 357 EEKLLKGIERMTKQRIPEGDLMGFD-----ASAIEAEKPEVR-EPRQPRPQRGEGKARGE 410
           +E+LL  IE++ K+ +P   L GFD     A A E ++   R E R+PR      + R  
Sbjct: 371 DERLLVDIEKLLKRSLPRTPLDGFDPTGAGARADENDRRRARTEVRRPRANGDGDEPRAR 430

Query: 411 RNKPAEKGAEQKERNRRSQSKSRKPARDSASGEAQVVARP 450
           RN PA        RN    S     +R      A + A+P
Sbjct: 431 RNDPA------SSRNAFRASDDSFFSRPYEPSAAAIAAQP 464