Pairwise Alignments

Query, 380 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 394 a.a., hemolysin D from Azospirillum brasilense Sp245

 Score =  344 bits (883), Expect = 2e-99
 Identities = 187/378 (49%), Positives = 253/378 (66%), Gaps = 19/378 (5%)

Query: 4   KSANAALMSILAMAVFLAGCQEE----AAPPAQQKPKVGIVTLQAEPFAVTTELPGRTRA 59
           ++A  +L    ++ V L  CQ++       PA    +V + T+Q +  +VTTELPGRT A
Sbjct: 4   RNAFLSLAVAASLTVVLGACQDKKHAAGGQPAPGPAEVAVATIQPQSLSVTTELPGRTAA 63

Query: 60  YRIAEVRPQVNGIIQKRLFTEGSDVKAGQQLYQIDASVYEATLKSAQASVA-------SS 112
           +R+AE+RPQV+GI+ KR FTEGSDVKAG QLYQID + YEA L  AQA +        ++
Sbjct: 64  FRVAEIRPQVSGIVLKRFFTEGSDVKAGDQLYQIDPATYEANLAVAQADIQKAEANLQAA 123

Query: 113 KSLADRYAELVKDQAVSKQAYDEARAASLQAEAELERAR-------IDVRYTKVLAPISG 165
           ++ A RY +LVK+  VSKQ YD+A A+  Q EA+L  AR       I++ YTKV APISG
Sbjct: 124 RNKAARYNDLVKNSVVSKQDYDDAMASLKQNEAQLAAARAAHNLARINLDYTKVFAPISG 183

Query: 166 RVGRSAVTEGALVSNGQAQELATIQQLDPIYVDVTQPARDLLALRRDLAEGRLQKSGDNA 225
           R+G+SAVTEGALV+  QA  LAT+QQLDPI+VDVTQ A  L+ LR+D+  GR++ +    
Sbjct: 184 RIGKSAVTEGALVTANQATALATVQQLDPIFVDVTQTASQLMQLRQDMESGRIRPAEPGK 243

Query: 226 AKVTLKLEDGS-DYAHEGKLEFSEVTVDAGTGSVTLRAVFPNPDKDLLPGMFVHAQLVAG 284
             V+L L      Y   G+L+FS+V+VD GT SV LRAVFPNP+++LLPG+FV A++  G
Sbjct: 244 IPVSLFLHAAEVPYPQRGELQFSDVSVDPGTSSVQLRAVFPNPNQELLPGLFVRARVEQG 303

Query: 285 MKSEAILVPQQGVTRNTKGDPTAMVVNAESKVEVRPIKTERAVGNRWLVGEGLQPGDRVI 344
           +   A+ VPQ+ V R   G     VV  ++KV  R IKTERA+ N WLV +GL+ G+R++
Sbjct: 304 VAQNALAVPQEAVQRGPDGSARVWVVGDDNKVNPRTIKTERAINNAWLVSDGLKAGERIV 363

Query: 345 TEGLQFIQPGVEVEAVPA 362
            EGLQ ++PG EV+ VPA
Sbjct: 364 VEGLQKVKPGGEVKPVPA 381