Pairwise Alignments

Query, 380 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 371 a.a., RND family efflux transporter, MFP subunit from Sphingomonas koreensis DSMZ 15582

 Score =  319 bits (817), Expect = 9e-92
 Identities = 184/376 (48%), Positives = 244/376 (64%), Gaps = 22/376 (5%)

Query: 1   MPIKSANAALMSILAMAVFLAGCQEEAAPPAQQKPKVGIVTLQAEPFAVTTELPGRTRAY 60
           MP+++  A   ++L     LAGC      P Q   +VG+VTL+AEP  +T+EL GRT A 
Sbjct: 1   MPLRTPIAVTAALL-----LAGCGGAKQMPPQGPAEVGVVTLRAEPVTMTSELTGRTTAT 55

Query: 61  RIAEVRPQVNGIIQKRLFTEGSDVKAGQQLYQIDASVYEAT-------LKSAQASVASSK 113
            IAE+RPQV+GII+ RLFTEGS V+AGQ LYQID  +Y A+       L SAQASV ++ 
Sbjct: 56  AIAEIRPQVDGIIKARLFTEGSYVRAGQPLYQIDPRLYVASRNQAAAQLASAQASVITAN 115

Query: 114 SLADRYAELVKDQAVSKQAYDEARAASLQAEAE-------LERARIDVRYTKVLAPISGR 166
           +   RY +L    AVSKQ  D+A A +   EA        L+ A++++ +T+V APISGR
Sbjct: 116 AKVARYRQLGGADAVSKQEIDDAVATARAGEASVRQYAATLDSAKVNLGFTRVYAPISGR 175

Query: 167 VGRSAVTEGALVSNGQAQELATIQQLDPIYVDVTQPARDLLALRRDLAEGRLQKSGDNAA 226
           +GRS VT+GALV  GQA  LATIQQLDPIYVD+ Q +  LLALR  LA+G +  +   + 
Sbjct: 176 IGRSNVTQGALVGTGQATALATIQQLDPIYVDIQQSSDALLALRESLAKGDVLPA---ST 232

Query: 227 KVTLKLEDGSDYAHEGKLEFSEVTVDAGTGSVTLRAVFPNPDKDLLPGMFVHAQLVAGMK 286
            V L L +G  Y   G +EF EV+VD G+G VTLRA FPNP+  LLPGMFV  +    + 
Sbjct: 233 TVQLVLSNGRVYPQTGTIEFGEVSVDPGSGMVTLRARFPNPNNLLLPGMFVRVKAPQAVV 292

Query: 287 SEAILVPQQGVTRNTKGDPTAMVVNAESKVEVRPIKTERAVGNRWLVGEGLQPGDRVITE 346
              IL PQQG+TR+ KG+ TA+VV+ + KVE R +   +A+G++WLV  GL+ G+R+I E
Sbjct: 293 RNGILAPQQGITRDAKGNATALVVSRDGKVEQRTVSVAQAIGDKWLVTGGLKAGERLIVE 352

Query: 347 GLQFIQPGVEVEAVPA 362
           G    +PG EV+AV A
Sbjct: 353 GTDKARPGAEVKAVAA 368