Pairwise Alignments

Query, 380 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 410 a.a., hemolysin D from Cupriavidus basilensis FW507-4G11

 Score =  325 bits (833), Expect = 1e-93
 Identities = 184/379 (48%), Positives = 248/379 (65%), Gaps = 21/379 (5%)

Query: 11  MSILAMAVFLAGCQEEAAPPAQQKPKVGIVTLQAEPFAVTTELPGRTRAYRIAEVRPQVN 70
           +S   +AV LA C ++ A P  Q  +VG+VT++     VT+ELPGRT A+ +A+VR +V+
Sbjct: 11  ISAATVAVILAACGQKPAAPPPQTLEVGVVTVKPATVPVTSELPGRTSAFLVAQVRARVD 70

Query: 71  GIIQKRLFTEGSDVKAGQQLYQIDASVY-------EATLKSAQASVASSKSLADRYAELV 123
           GI+ +R FTEG +VK GQ+LY+ID + Y       +A L  AQA+V +  +L  RY  LV
Sbjct: 71  GIVLRREFTEGDEVKLGQRLYKIDPTPYIAALNNAKAVLAKAQANVGTQNALVQRYKILV 130

Query: 124 KDQAVSKQAYDEARAASLQAEAEL-------ERARIDVRYTKVLAPISGRVGRSAVTEGA 176
              AVSKQ YD A AA  QA A++       E A+I++ YT V++PI+GR G S VT GA
Sbjct: 131 AANAVSKQDYDNAVAALGQAVADVASGKAGVETAQINLGYTDVVSPITGRSGLSQVTPGA 190

Query: 177 LVSNGQAQELATIQQLDPIYVDVTQPARDLLALRRDLAEGRLQKSGDNAAKVTLKLEDGS 236
            V   QA  L T+QQLDP+YV++TQ + + L LRR + EGRLQ +G NAAKVTL LEDG 
Sbjct: 191 YVQASQATLLTTVQQLDPVYVNLTQSSVEGLRLRRQIQEGRLQTTGANAAKVTLLLEDGR 250

Query: 237 DYAHEGKLEFSEVTVDAGTGSVTLRAVFPNPDKDLLPGMFVHAQLVAGMKSEAILVPQQG 296
            Y   G+L+F++V+VD  TGSVT+RA+FPN D+ LLPGMFV A++  G+  +AI+VPQ G
Sbjct: 251 AYPQPGQLQFTDVSVDQSTGSVTVRAIFPNKDRVLLPGMFVRARIDQGVNDKAIVVPQIG 310

Query: 297 VTRNTKGDPTAMVVNAESKVEVRPIKTERAVGNRWLVGEGLQPGDRVITEGLQFIQPGVE 356
           VT + KG   A+VV  ++KV  R I T    G+ W+V  GLQPGDRVI  G++  +PG+ 
Sbjct: 311 VTHDAKGQAVALVVGQDNKVTQRQIVTTGTYGSGWVVDGGLQPGDRVIVNGVEKAKPGMT 370

Query: 357 VEAVPATNVDNRGGVPAQP 375
           V+ V A         PAQP
Sbjct: 371 VKPVEAQ-------APAQP 382