Pairwise Alignments

Query, 458 a.a., signal recognition particle protein from Pseudomonas stutzeri RCH2

Subject, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

 Score =  174 bits (442), Expect = 3e-48
 Identities = 100/293 (34%), Positives = 160/293 (54%), Gaps = 8/293 (2%)

Query: 9   LSQTLRHVTGK-AKLTEDNIKDTLREVRMALLEADVALPVVKEFVNRVKERAVGTEVSKS 67
           ++++++ V GK   LTED+I+D L E+ M L EADVA  VV++ +  +K + VG ++S  
Sbjct: 78  VTKSIKKVLGKDVILTEDDIEDVLEEMEMELFEADVAFDVVEKIIESLKNQLVGLKISAK 137

Query: 68  LTPGQAFVKIVRAELEELMGAANEDLALQVTP------PAVVLMAGLQGAGKTTTVGKLA 121
             P +  +  ++  ++ ++     D+   +        PAV+L  G+ G GKTT++ KLA
Sbjct: 138 DDPEEITINALKKSIKGILSQEKIDVFNLIDEKKANGEPAVLLFVGINGTGKTTSISKLA 197

Query: 122 RFLKERKKKTVLVVSADVYRPAAIKQLETLAAEVGVTFFPSDISQKPVDIAQAAIREAKL 181
             LKE+    V+  + D +R  AI+QLE      G+             +   AI  AK 
Sbjct: 198 YILKEKGYSAVMA-AGDTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYDAISHAKA 256

Query: 182 KFIDVVLVDTAGRLAIDAEMMAEIQAVHAAINPAETLFVVDAMTGQDAANTARAFGEALP 241
           K ++VVL DTAGR   +  +M EI+ V     P   +FV D++ G DA + A  F   + 
Sbjct: 257 KGLNVVLADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFNNTIN 316

Query: 242 LTGVVLTKVDGDARGGAALSVRHVTGKPIKFLGMGEKSDALEPFHPDRIASRI 294
           + G +LTK D DA+GGAALS+ +  GKPI F+G+G++   L+ F  D +  ++
Sbjct: 317 INGAILTKTDADAKGGAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKL 369