Pairwise Alignments

Query, 178 a.a., 16S rRNA processing protein RimM from Pseudomonas stutzeri RCH2

Subject, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (302), Expect = 1e-32
 Identities = 64/177 (36%), Positives = 108/177 (61%), Gaps = 2/177 (1%)

Query: 4   TSAPVDDLVVIGKIVSVHGVRGDVKVYSFTDPIDNLLDYRRWTLRRGDEVKQVELVKGRL 63
           T +  ++ +V+GK+ S +G+RG +KV+S+TD  +++ DY  W + +  E  + ++   + 
Sbjct: 8   TMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKR 67

Query: 64  QGKILVATLEGLDDREVARTYADFEICIPRSELPALDDGEYYWYQLQGLKVINQSAQLLG 123
             K  V  L+GLD RE A    +FEI I  + LP L + E+YW +L G++V+  +   LG
Sbjct: 68  HNKGWVVKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLG 127

Query: 124 QVDHLLETGANDVLVVKP-CAGSLDDRERLLPYTDQCVLK-IDLEVGEMQVDWDADF 178
            V  ++ETG+NDVLVVK     +   +ERL+P+ ++ V+K +D +   ++VDWD  F
Sbjct: 128 VVTDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVDWDPAF 184