Pairwise Alignments

Query, 212 a.a., endonuclease III from Pseudomonas stutzeri RCH2

Subject, 232 a.a., endonuclease III from Methanococcus maripaludis S2

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 14  HEDNPE-PKTELAYNTPFELLIAVILSAQATDVGVNKATAKLYPVAN-TPEAIYALGYDG 71
           H +N E PKT+   N  FE+ I  IL+   +   V K+   L  +   TPE I  L  + 
Sbjct: 44  HPNNYEYPKTK---NQCFEVCIGAILTQNTSWPSVEKSLKNLRKLIEITPENIINLDIEQ 100

Query: 72  LCEYIRTIGLYPSKAKNVIETCRILIEKHGGQVPDNREDLEALPGVGRKTANVVLNTAFR 131
           L E I+  G Y  K+  +       I+ +   VP  RE+L  L GVG +TA+ +L  AF+
Sbjct: 101 LKEAIKPSGYYNQKSVRLKGFSEFFIKLN--HVP-TREELLKLNGVGPETADSMLLYAFK 157

Query: 132 QFTMAVDTHIFRVSNRTGIAPGKNVLEVERKL 163
             +  VD +  R+     +  G    +  ++L
Sbjct: 158 VPSFVVDAYTKRILINLNLIDGSEKYDKIKEL 189