Pairwise Alignments

Query, 313 a.a., Negative regulator of sigma E activity from Pseudomonas stutzeri RCH2

Subject, 318 a.a., sigma-E factor regulatory protein RseB from Klebsiella michiganensis M5al

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 78/296 (26%), Positives = 129/296 (43%), Gaps = 24/296 (8%)

Query: 29  RLAMAEQKQSYAGTFVYERNGSFSSHAVWQQVEAGRVRERLLQLDGAPAEVVLVDGQMQC 88
           ++ +A Q  +Y  +FV        S          R   +LLQLDG   EVVL   ++  
Sbjct: 33  QMNLASQSLNYELSFVSINKQGVESLRYRHAKLDNRTLAQLLQLDGPRREVVLRGTEISY 92

Query: 89  ATDELAAQVREAQAWHGQRL----------DPKALSEWYEFRQIGDSRVAGRPAVALAVV 138
               L     +    +G  +          D K L+ +Y+F  +G +R+A R    + VV
Sbjct: 93  FEPGL-----DPFTLNGDYIVDSLPSLVYSDFKRLASYYDFISVGRTRIADRLCDVVRVV 147

Query: 139 PRDQHRYGFELHLDRDTALPLKSLMLNEKGQLLERFQFTHF----STDIDTQELTASSGC 194
            RD  RY +   LD +T LPL+  +L+  G+ LE+F+   F    +     + L+ ++  
Sbjct: 148 ARDGTRYSYIAWLDAETKLPLRVDLLDRDGETLEQFRVVSFNVGDNVSASMETLSKANLP 207

Query: 195 KAVSISKREANLSSAWRSDWLPAGFKLLDANQRPSPASSETVSWLSYGDGLAKFSVFLEP 254
             +S+ +     +  W   WLP G   + ++QR  P     V    Y DGL  FS+ +  
Sbjct: 208 PQLSVPEGGNKANFNWAPTWLPQGVAEVSSSQRRLPTFDGPVESRLYSDGLFSFSININR 267

Query: 255 LRGALVEDARSQMGPTVAVSKRISTADGDVMVTVVGEIPLGTAERVALSMRTGAEQ 310
                 +        TVA     +T   +  +T+VGE+P  TA+R++ S++  A Q
Sbjct: 268 ATANSSDQLLRTGRRTVA-----TTVRDNAEITIVGELPPQTAKRISDSIKFRAVQ 318