Pairwise Alignments

Query, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

Subject, 243 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  105 bits (262), Expect = 8e-28
 Identities = 80/225 (35%), Positives = 112/225 (49%), Gaps = 35/225 (15%)

Query: 25  HYIGRVLRLTAGSAVQLFDGSGDEF------RGELLEVGKKTVTVELHEHLKGMPESALQ 78
           HY+ RVLRL  G    + DG G  +      R +L  VG   V          +P +  +
Sbjct: 28  HYLQRVLRLKPGDRCAVIDGQGGLWTAELGDRDQLFPVGAVPV----------LPPAQPR 77

Query: 79  IHLGQGLSRGERMDWAIQKATELGVAQITPIISERCEVRLNDERADKRLAHWRQIAISAC 138
           + L Q L + +  D  I++ATELGV  I P+IS+R +VR   ++ D+    WR+IAI A 
Sbjct: 78  LTLIQSLPK-QGFDEVIRQATELGVTTIQPVISDRSQVRPEAQKTDR----WRKIAIEAS 132

Query: 139 EQCGRSVLPIIHAPVSLRDWLAVEAEL-----------KLVLHPIAEPLASHAKPRTLAF 187
           EQ  R  LP +     +R W    A++           +  L  +   L +      LA 
Sbjct: 133 EQSERLYLPQLEP---IRLWSEAIAQIPADSLRCICLARRSLPNLLPWLQAQPAWTDLAI 189

Query: 188 LIGPEGGLSENEVEQAAVQGFLPARLGPRVLRTETAPVVALSVAQ 232
            IGPEGG S+ E+EQA   G+ P  LG  +LR  TAP+VALS+AQ
Sbjct: 190 AIGPEGGWSDAEIEQAIAVGWTPVSLGSSILRAVTAPIVALSLAQ 234