Pairwise Alignments

Query, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

Subject, 245 a.a., 16S ribosomal RNA methyltransferase RsmE from Sinorhizobium meliloti 1021

 Score =  107 bits (266), Expect = 3e-28
 Identities = 79/250 (31%), Positives = 121/250 (48%), Gaps = 24/250 (9%)

Query: 2   RLSRFFIDAPLSLG-QHPLPEASAHYIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKKT 60
           R+ R FI+  L  G +H       +Y+  VLRL  GS++ +F+G   E+R E+    +K 
Sbjct: 6   RMQRLFIENALHAGAKHEATREQFNYLINVLRLGEGSSLLVFNGRDGEWRAEIAMPSRKQ 65

Query: 61  VTVELHEHLKGMPESALQIHLGQGLSRGERMDWAIQKATELGVAQITPIISERCEVRLND 120
             +   E  +  P     ++L   L  G R+D+ +QKA E+G   + P++++  + ++  
Sbjct: 66  AVLVAVEQTRPQPAPCDLVYLFAPLKVG-RLDYLVQKAVEMGAGVLQPVMTQHVQGKIGS 124

Query: 121 ERADKRLAHWRQIAISACEQCGRSVLPIIHAPVSLRDWLAVEAELKLVLH---------- 170
                 L   R   I A EQCG   +P +  P  L D L      + ++           
Sbjct: 125 ------LERVRANVIEAAEQCGVLGIPAVEEPRKLEDLLIDWPRDRRIVFCDEGNDSQNP 178

Query: 171 -PIAEPLASHAKPRTLAFLIGPEGGLSENEVEQAAVQGFLPA-RLGPRVLRTETAPVVAL 228
            PI E +A     R LA LIGPEGG SE E +    + F+ A  LGPR+LR +TA V A+
Sbjct: 179 LPILEGIAE----RRLALLIGPEGGFSEAERDLLRSRDFVTAIPLGPRILRADTAAVAAM 234

Query: 229 SVAQQLWGDF 238
           +V Q   GD+
Sbjct: 235 AVIQATLGDW 244