Pairwise Alignments

Query, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

Subject, 234 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 22/238 (9%)

Query: 7   FIDAPLSLGQHPLPEASAHYIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKKTVTVELH 66
           F    ++   + L E  + +  RVLRLT GS V L DG G  +  E+     K V++ + 
Sbjct: 4   FYTPDITQNTYTLNEEESKHCVRVLRLTVGSIVNLVDGKGGFYTAEITSDNPKKVSLSIL 63

Query: 67  EHLKGMPESALQIHLGQGLSRG-ERMDWAIQKATELGVAQITPIISERCEVRLNDERADK 125
           +  +   +    +H+    ++  +R++W ++KATELG+ +ITPII++R E R+  E  D+
Sbjct: 64  KVEREFHKRNHYLHIAVAPTKNIDRIEWFLEKATELGIDEITPIITDRSERRVVKE--DR 121

Query: 126 RLAHWRQIAISACEQCGRSVLPIIHAPVSLRDWLAVEAE-LKLVLH--------PIAEPL 176
            +    ++  SA +Q  ++  P ++  +S   +L    +  KL+ H         I++ +
Sbjct: 122 LI----KVITSAVKQSIKAYHPKLNDAISYDAFLKESFDGEKLIAHCIDNGEKEYISKLV 177

Query: 177 ASHAKPRTLAFLIGPEGGLSENEVEQAAVQGFLPARLGPRVLRTETAPVVALSVAQQL 234
           A H K      LIGPEG  + +EV  A  +GF    LG   LRTETA   ALSV  ++
Sbjct: 178 APHQK---YLILIGPEGDFTPDEVNLALNKGFKALTLGDNRLRTETA---ALSVCFEI 229