Pairwise Alignments

Query, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

Subject, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Klebsiella michiganensis M5al

 Score =  191 bits (484), Expect = 1e-53
 Identities = 109/241 (45%), Positives = 148/241 (61%), Gaps = 4/241 (1%)

Query: 1   MRLSRFFIDAPLSLG-QHPLPEASAHYIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKK 59
           MR+ R      ++ G Q  L + +A+++GRVLR+  G A++LFDGS   F   ++E GKK
Sbjct: 1   MRIPRIHHPERITTGSQIALSDDAANHVGRVLRMGKGQAIELFDGSNQIFEAVIVEAGKK 60

Query: 60  TVTVELHEHLKGMPESALQIHLGQGLSRGERMDWAIQKATELGVAQITPIISERCEVRLN 119
            V VE+        ES L IHLGQ +SRGE+M++ IQK+ ELGV+ ITP+ SERC V+L+
Sbjct: 61  NVLVEVQSSKVDNRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD 120

Query: 120 DERADKRLAHWRQIAISACEQCGRSVLPIIHAPVSLRDWLAVEAE-LKLVLHPIAEPLAS 178
            ER  K++  W++IAI+ACEQ GR+V+P I   + L  W A + E LKL LHP A    +
Sbjct: 121 AERLQKKIQQWQKIAIAACEQSGRNVVPEIRPAMQLEAWCAEQDEGLKLNLHPRASASIN 180

Query: 179 --HAKPRTLAFLIGPEGGLSENEVEQAAVQGFLPARLGPRVLRTETAPVVALSVAQQLWG 236
                   +  LIGPEGGLS  E+   A   F    LGPRVLRTET  + A++  Q  +G
Sbjct: 181 TLPLPVERIRLLIGPEGGLSAEEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG 240

Query: 237 D 237
           D
Sbjct: 241 D 241