Pairwise Alignments

Query, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

Subject, 241 a.a., 16S rRNA methyltransferase from Herbaspirillum seropedicae SmR1

 Score =  167 bits (423), Expect = 2e-46
 Identities = 96/241 (39%), Positives = 136/241 (56%), Gaps = 7/241 (2%)

Query: 3   LSRFFIDAPLSLGQH-PLPEASAHYIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKKTV 61
           + RF +   L +G    LPE  AH+I  VLRL  G A+ LF+G G E+   L  V KK  
Sbjct: 1   MPRFHLPQALGIGSDLVLPEQIAHHI-HVLRLQPGDAITLFNGEGGEYTATLSAVEKKRA 59

Query: 62  TVELHEHLKGMPESALQIHLGQGLSRGERMDWAIQKATELGVAQITPIISERCEVRLNDE 121
             ++        E    + L Q L  G +MDW ++KA ELG   + P+ ++RC VRL+ E
Sbjct: 60  HAQVKTFSPREAELPYALTLAQALPEGAKMDWIVEKAVELGATALQPLAAQRCVVRLSGE 119

Query: 122 RADKRLAHWRQIAISACEQCGRSVLPIIHAPVSLRDWLA-VEAELKLVLHPI-AEPL--- 176
           RA+K+ AHW+ I  +A EQCGR+ LP +      + W+A  +   +++L P  AEPL   
Sbjct: 120 RAEKKQAHWQGIIHAAAEQCGRNRLPHLGEVTEFKRWIAQSDLHRRILLSPRGAEPLSGW 179

Query: 177 ASHAKPRTLAFLIGPEGGLSENEVEQAAVQGFLPARLGPRVLRTETAPVVALSVAQQLWG 236
           A H  P+ +  ++GPEGG S+ E E A  QG L   +G RVLRTETA + AL+    +WG
Sbjct: 180 ARHHPPQAVTLVVGPEGGFSDEEEELACAQGALMLSMGSRVLRTETAGLAALAALNAVWG 239

Query: 237 D 237
           +
Sbjct: 240 E 240