Pairwise Alignments

Query, 251 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 291 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 74/251 (29%), Positives = 106/251 (42%), Gaps = 16/251 (6%)

Query: 14  HQHAHDY-----HQLVMSLSG-RAEFEVNGTGGEVCRMRACLVPGDADHGFAGMGDNRML 67
           H  A DY     H L   ++G    F  +  G +    + C++P D   G+   GD R+ 
Sbjct: 39  HHDAQDYEAPSHHTLSCYIAGGTGTFRRDQPGTKGGPDKLCILPADHQSGWVINGDIRLA 98

Query: 68  IIDLDEQD--------VGTEDPELLARLFEAPRYPALDADFQNLLAYAGAELA-RYGSDP 118
            +    +         +  E  EL  R       P     F+ L+A    E   R  +  
Sbjct: 99  HLYFSPEQFALGCVTLLDREPRELQLRERTFLEDPPQARRFRQLIALNWDEPGERLLTSS 158

Query: 119 LLARALGGVLLRALHLRLFGESLQRPVGPLDIQRLDSHIQDNLARRITVAELAQVVCLSP 178
           L    L   LL  + +R  G  L+  +     ++L   I   +A  I++ +LA +  LS 
Sbjct: 159 LAHEMLSHALLSQVGVRE-GLRLKGGLAAHQRRQLVEFIDHQMAEAISLGQLAGLCALSE 217

Query: 179 SHFHAQFKDCVGLTPHQYLLKTRLDRAARLLRETPLPLVRIAEECGFSSQSALTTATRRY 238
            HF   F+   GL PHQY+L  RL  A  LLR T  PL  IA  CGF+S S  T   R+ 
Sbjct: 218 YHFARMFRVSFGLPPHQYVLARRLSHARELLRTTSQPLGDIALACGFASASHFTNRFRQA 277

Query: 239 LGLTPRGLRKS 249
           LG TP   R++
Sbjct: 278 LGGTPGEYRQA 288