Pairwise Alignments

Query, 494 a.a., L-proline:Na+ symporter (from data) from Pseudomonas stutzeri RCH2

Subject, 482 a.a., sodium/proline symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  509 bits (1311), Expect = e-149
 Identities = 262/472 (55%), Positives = 343/472 (72%), Gaps = 12/472 (2%)

Query: 1   MSISTPTLITFLIYIAAMILIGFVAYRATKNFDDYILGGRSLGSFVTALSAGASDMSGWL 60
           MSI TP L+TF+ Y+A M+ IGF AY+AT + DDYILGGR +G  VTALS GASDMSGWL
Sbjct: 1   MSIDTPILVTFVGYLALMMGIGFWAYKATDSVDDYILGGRKMGPGVTALSVGASDMSGWL 60

Query: 61  LMGLPGAIFVAGLSESWIAIGLIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFED 120
           L+GLPGA+++ GL E+WI IGL++GAWLNWLFVA RLR++T+   NALTLPD+F  RF D
Sbjct: 61  LLGLPGAVYLGGLGEAWIGIGLVIGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHD 120

Query: 121 ESRMLRIFSALVILVFFTIYCASGVVAGARLFESSFGVPYEYALWIGAAATILYVFIGGF 180
           ++ +LR  SAL ILVFFT Y +SG+V GA LFE  FG+ Y  AL IG+A  + Y F+GGF
Sbjct: 121 KAGLLRFVSALTILVFFTFYASSGMVGGAILFEKVFGLDYTAALVIGSAIIVGYTFVGGF 180

Query: 181 LAVSWTDTVQATLMIFALLITPVFVILALGDMGAAMDTIATQNPAAFDMFSGLSFVAIIS 240
            AVSWTD  Q  LM+ ALLI P+  I    +  A++DT++ +  +      G + + + S
Sbjct: 181 FAVSWTDFFQGCLMLIALLIVPM-AIFTNSESHASIDTLSPEMLSLIG--EGTTLMGVAS 237

Query: 241 LLAWGLGYFGQPHILVRFMAADSIKTIPNARRIGMAWMILTLAGAVAVGFFGIAYFAGHP 300
           L+AWGLGYFGQPHIL RFMA +  + +P +RRI M+WMI++L GA+A G  G  YFA  P
Sbjct: 238 LMAWGLGYFGQPHILSRFMAIERPEHLPVSRRIAMSWMIVSLMGALATGLAGSLYFAKEP 297

Query: 301 EQAGAVSQNGERVFMELVKILFNPWVAGIILSGVLAAVMSTLSAQLLVSSSALTQDFYKA 360
                   N E VF+ L ++ FNPW+AG++++ +L+A+MST+ +QLLV SS +T+DFY+ 
Sbjct: 298 ------LANAETVFIHLAQVAFNPWIAGLLIAAILSAIMSTIDSQLLVCSSVVTEDFYR- 350

Query: 361 MLRKSASQTELVWVGRGMVLLIALIAIGIASNPESKVLGLVSYAWAGFGAAFGPVVLISL 420
            LR  A   EL+ VGR  VL IA+IA  +A +P+S VLGLVSYAWAGFGAAFGPVVL+SL
Sbjct: 351 KLRPKADDNELMRVGRIGVLAIAIIAGVVALDPQSSVLGLVSYAWAGFGAAFGPVVLLSL 410

Query: 421 LWKRMTRNGALAGMLVGAVTVVVWKEFIG--LGLYEIIPGFILASIAIFVVS 470
            W+  ++ GALA ++ GAVTVVVWK+  G    LYEI+PGFILA++A  ++S
Sbjct: 411 FWRGYSKTGALATIITGAVTVVVWKQLSGGFFDLYEILPGFILATLAGVLIS 462