Pairwise Alignments

Query, 494 a.a., L-proline:Na+ symporter (from data) from Pseudomonas stutzeri RCH2

Subject, 498 a.a., sodium/proline symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  424 bits (1089), Expect = e-123
 Identities = 219/488 (44%), Positives = 321/488 (65%), Gaps = 13/488 (2%)

Query: 9   ITFLIYIAAMILIGFVAYR-ATKNFDDYILGGRSLGSFVTALSAGASDMSGWLLMGLPGA 67
           ++  IY  AM+ IG  AYR +T +   YILGGR +   VTALSAGASDMSGW+LMGLPGA
Sbjct: 7   VSLAIYFIAMLAIGLFAYRKSTDDVSGYILGGRQVSPHVTALSAGASDMSGWMLMGLPGA 66

Query: 68  IFVAGLSESWIAIGLIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFEDESRMLRI 127
           +F+ G    +IA+GL++GA +N+L VA +LRV+TE   NALT+P++F+ RF      +RI
Sbjct: 67  MFLVGFETLYIALGLLIGALINYLVVAPKLRVYTEVADNALTIPEFFAKRFGQADNSIRI 126

Query: 128 FSALVILVFFTIYCASGVVAGARLFESSFGVPYEYALWIGAAATILYVFIGGFLAVSWTD 187
            +A +I++FFT+Y ++G+VAG +LFES+FG+ Y+  L +  A  + Y  +GGFLAVS TD
Sbjct: 127 IAAAIIVIFFTLYTSAGLVAGGKLFESAFGLNYDIGLVVTLAVVVSYTLLGGFLAVSLTD 186

Query: 188 TVQATLMIFALLITPVFVILALGDMGAAMDTIATQNPAAFDMFSGLSFVAIISLLAWGLG 247
            VQ  +M  AL++ P             M+      P   D    ++ + +IS L+WGLG
Sbjct: 187 FVQGCIMFVALVLVPFVAYQEFTSADRMMNFAYQSIPHFTDAMQNVTLLGLISSLSWGLG 246

Query: 248 YFGQPHILVRFMAADSIKTIPNARRIGMAWMILTLAGAVAVGFFGIAYFAGHPEQAGAVS 307
           YFGQPHI+VRFMA  S+  I  ARRIG++WM +T+ GA+A G  GIAY      + G   
Sbjct: 247 YFGQPHIIVRFMAIRSVADIKTARRIGISWMTVTIIGALATGLVGIAY----ANKFGMKL 302

Query: 308 QNGERVFMELVKILFNPWVAGIILSGVLAAVMSTLSAQLLVSSSALTQDFYKAMLRKSAS 367
            + E +F+   ++LF+P ++G +L+ +LAA+MST+S+QLLVSSS+LT+D Y+ + +K AS
Sbjct: 303 SDPETIFIVFSELLFHPLISGFLLAAILAAIMSTISSQLLVSSSSLTEDIYRTLSKKQAS 362

Query: 368 QTELVWVGRGMVLLIALIAIGIASNPESKVLGLVSYAWAGFGAAFGPVVLISLLWKRMTR 427
           + E+V +GR  V  +A++A  +A +  + +L LVS AWAGFGAAFGP+VL SL    +T 
Sbjct: 363 EQEMVKMGRYGVAGVAIVATLLALDRSNSILSLVSNAWAGFGAAFGPLVLFSLYKANLTH 422

Query: 428 NGALAGMLVGAVTVVVW--------KEFIGLGLYEIIPGFILASIAIFVVSKMGAEPAPS 479
             A+AG++ GA+TV+ W         + +   +YE+IPGF+++S  I++VSK   +P   
Sbjct: 423 KAAIAGIISGALTVLFWIYAPVLSDGKALSSLVYEMIPGFVVSSTVIYLVSKFDNDPCAK 482

Query: 480 IIKRFEEA 487
             K+F +A
Sbjct: 483 TTKQFHQA 490