Pairwise Alignments

Query, 834 a.a., periplasmic nitrate reductase, large subunit from Pseudomonas stutzeri RCH2

Subject, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  114 bits (286), Expect = 2e-29
 Identities = 139/603 (23%), Positives = 242/603 (40%), Gaps = 102/603 (16%)

Query: 1   MSLTRRQFAK-----ANAAAIAATV--AGMPIASTASNLVTEADATNLKWDKAPCRFCGT 53
           + ++RR F K     A  AA+ A++   GM   + AS  V  +  T +K  +  C  C  
Sbjct: 17  LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASE-VDRSAKTEVK--RTICSHCSV 73

Query: 54  GCGVMVATREGRVVATHGDVKAEVNRGINCVKGYFLSKIMYGSDRLTQPLLRMKDGKFDK 113
           GCG+    + G             N G +C KG  L +  +G  RL  P+ +++ GK+ K
Sbjct: 74  GCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRLKYPM-KLEGGKWKK 132

Query: 114 QGEFQPITWDQAFDIMEEKYKAALKQGGPEAIGMFGSGQWTIWEGYAANKLMKAGFRSNN 173
                 I+W+QA + + +K     ++ GP+++   GS + +  + Y   K M + + +NN
Sbjct: 133 ------ISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRK-MASLWGTNN 185

Query: 174 IDPNARHCMASAAFGFMRTFGMDEPMGCYEDIEAADAFVLWGSNMAEMHPVLWTRVTDRR 233
           +D  AR C ++   G   T+G       + D+    + +  GSN AE HPV    +   +
Sbjct: 186 VDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQHILIAK 245

Query: 234 LSAPNVKVAVMSTFEHRSFELADIPMIFNPQTDLVILNYIANHIIQSGAVNKDFIEKHTK 293
               + K+ V      R+   AD  +   P +D+  +  +  H+ ++   +K++I +   
Sbjct: 246 -EKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEYIRQRV- 303

Query: 294 FAKGATNIGYGLRPTDPLELKAENAAVANTWSDISFEDYAEFLKTYTLEYAAKESGVPAE 353
                    +G+      E++AE A     W+    E               + +GV  E
Sbjct: 304 ---------FGMD-----EIRAEVA----KWTPAEVE---------------RVTGVSEE 330

Query: 354 RLQALAELYADPKVKVMSFWTMGFNQHTRGVWANNMIYNIHLLTGKISEPGNSPFSLTGQ 413
            +   A+  A+ +   +  W MG  QHT G         + L  G I + G       G 
Sbjct: 331 EVYNTAKTLAENRPGCV-VWCMGGTQHTTGNNNTRAYCILELALGNIGKSGGGANIFRGH 389

Query: 414 PSACGTAREVGTFSHRLPA--DMAVANPKHRAIAEKIW---------KLPEGTI-----Q 457
            +  G A ++G  S  LP    +   + KH A    +W         +  +GT       
Sbjct: 390 DNVQG-ATDLGVLSDTLPGYYGLTEGSWKHWA---SVWGVDFEWIKNRFDQGTYNGALPM 445

Query: 458 EKPGFHAVEQSRKLKDGVLK--------------VYWTQVTNNMQAGPNVMQEILPGWRN 503
           E PG   +  SR + DGVL+               YW    N+   G  + + +      
Sbjct: 446 ETPG---IPVSRWI-DGVLENKDNLQQRENIRAMFYWGHAVNSQTRGVEMKKAM-----Q 496

Query: 504 PETFIIVSDVYPTVSAQAAD-----LILPSAMWVEKEGAYGNAERRTQFWHQLVTAPGEA 558
               +++ D YPTV+A   D      +LP+    E  G+   + R  Q+  Q++    E+
Sbjct: 497 KLDMMVIVDPYPTVAAVMNDRTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFES 556

Query: 559 RSD 561
           + D
Sbjct: 557 KPD 559



 Score = 44.3 bits (103), Expect = 3e-08
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 690 YGYGDKKAIIFALPY---DVPAEVPDKDYPFWLSTGRVLEHWHTGSMTQRVDELHQAVPD 746
           Y   D +A IF +P     + A+    +YP  L++GR++E+   G  T+    L +   +
Sbjct: 787 YPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVEYEGGGEETRSNPWLAELQQE 846

Query: 747 ALVYMHPEDARKLNARRGSVVKVI-SRRGEMQARIETRGRNKPPMGLVFVPFFDANK 802
             V ++P+DA  L    G +V V  + +G ++ +     R KP  G+ F+PF    K
Sbjct: 847 MFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKP--GMAFLPFHFGGK 901