Pairwise Alignments

Query, 178 a.a., Chemotaxis signal transduction protein from Pseudomonas stutzeri RCH2

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 50.1 bits (118), Expect = 6e-11
 Identities = 28/86 (32%), Positives = 47/86 (54%)

Query: 38  IGFRMGGRLFVAPMGEVGEILHEPRYTLLPGVKSWVKGVANVRGRLLPVMDLCGYFGLEL 97
           + F +G  LF   M EV EI+  P    +P   S++ G++N+RG++LPV+ L     ++ 
Sbjct: 21  VNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCMDR 80

Query: 98  SPLRKQRRVLVVDHQEVFAGLTVDEV 123
           +   +  RV+V+   +   G TVD V
Sbjct: 81  TSATEATRVIVITIGKTKIGFTVDRV 106



 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 14/148 (9%)

Query: 40  FRMGGRLFVAPMGEVGEILHEPR-YTLLPGVKSWVKGVANVRGRLLPVMDLCGYFGLELS 98
           F++    F   +  V EI+  P   + +P    +++GV N+RG +LP++D+   F L   
Sbjct: 374 FKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFHLPEM 433

Query: 99  PLRKQRRVLVVDHQEVFAGLTVDEVFGMQHFPVEAFSEELPPIE----------ASIQPF 148
              +++R+LVV+ +++  G  VD V  +   P E+  E+ P +            ++ P 
Sbjct: 434 ARHERQRILVVNFEKISTGFIVDSVSEVLRIP-ESQLEDAPVLSEEQAQLMRQMVNLSPR 492

Query: 149 IHGVFQREQPWLVFSPHALATHQAFLDV 176
           + GV   +Q  L+ +      H A  D+
Sbjct: 493 MIGVLSADQ--LISNTEMYKLHMAANDM 518



 Score = 41.2 bits (95), Expect = 3e-08
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 44  GRLFVAPMGEVGEILHEPRY-TLLPGVKSWVKGVANVRGRLLPVMDLCGYFGLELSPLRK 102
           G+ +  P+ +  EI+  P   T +P  +S + GV N+RG+ LP++ L   FGL       
Sbjct: 200 GQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSISFSD 259

Query: 103 QRRVLVV-----DHQEVFAGLTVDEV 123
             RVLVV     + + +  G+ VD V
Sbjct: 260 SHRVLVVNISLSEKERLPVGVVVDAV 285