Pairwise Alignments

Query, 178 a.a., Chemotaxis signal transduction protein from Pseudomonas stutzeri RCH2

Subject, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 47.4 bits (111), Expect = 4e-10
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 40  FRMGGRLFVAPMGEVGEILHEPRYTLLPGVKSWVKGVANVRGRLLPVMDLCGYFGLELSP 99
           F +   LF  P+ EV EI+  P    +P   + ++G+AN+RG +LPV+ L   FG+    
Sbjct: 38  FHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRHVFGMAPVV 97

Query: 100 LRKQRRVLVVDHQEVFAGLTVDEV 123
                RV+V+D Q    GL VD V
Sbjct: 98  HDDATRVVVLD-QGRPVGLVVDRV 120



 Score = 47.0 bits (110), Expect = 6e-10
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%)

Query: 38  IGFRMGGRLFVAPMGEVGEILHEPR-YTLLPGVKSWVKGVANVRGRLLPVMDLCGYFGLE 96
           + FR+    +  P+  V EI+  P   T +P    +++GV N+RG +LPV+D    FGL 
Sbjct: 387 VAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRRRFGLP 446

Query: 97  LSPLRKQRRVLVVDHQEVFAGLTVDEVFGMQHFP 130
                 ++R++V   + V  G  VD V  +   P
Sbjct: 447 GMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIP 480



 Score = 40.8 bits (94), Expect = 4e-08
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 38  IGFRMGGRLFVAPMGEVGEILHEPRY-TLLPGVKSWVKGVANVRGRLLPVMDLCGYFGLE 96
           + F + G+ +  P+  V EI+  P   T +P   + V GV  +R RLLP++ L   FGL 
Sbjct: 208 VSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPLVGLREMFGLP 267

Query: 97  LSPLRKQRRVLVV 109
              L +  +++VV
Sbjct: 268 TLALTETNKIVVV 280