Pairwise Alignments

Query, 546 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

Subject, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

 Score =  774 bits (1999), Expect = 0.0
 Identities = 369/525 (70%), Positives = 453/525 (86%), Gaps = 1/525 (0%)

Query: 6   VVDLSRLQFAMTAMYHFLFVPLTLGLAFLLAIMESVYVMTGKQVYKDMTQFWGKLFGINF 65
           VVDLSRLQFA+TAMYHFLFVPLTLG+AFLLAIMES+YVMT KQ+YKDMT+FWGKLFGINF
Sbjct: 17  VVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGINF 76

Query: 66  ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 125
           ALGV TGLTMEFQFGTNW+YYSHYVGDIFGAPLAIE L+AFFLESTF+GLFFFGWDRLSK
Sbjct: 77  ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLSK 136

Query: 126 VQHLAVTWLVALGSNLSALWILIANGWMQNPVGSEFNFETMRMELVDFGALLFNPVAQVK 185
            QHL VTWLVALGSN SALWIL+ANGWMQNPVGSEFNFETMRME+V F  ++ NPVAQVK
Sbjct: 137 RQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQVK 196

Query: 186 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLGFARRSFAIAAVFGLASTISVIILGDESGY 245
           FVHTV+AGY TGA+F+L IS++YLLK RD+ FARRSFAIAA FG+AS +SVI+LGDESGY
Sbjct: 197 FVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDESGY 256

Query: 246 EIGDVQKVKLAAIEAEWDTHPAPAGFTLFGLPNQQEMRTDYEVKIPYALGLIATRSVDEE 305
           E+G+VQ+VKLAAIE+EW T PAPA FTLFG+PNQ+EMRTDY +KIP+ALG+IATRS+DE+
Sbjct: 257 ELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLDEQ 316

Query: 306 IKGIKQLVAEHELRIRNGMLAYERLQVLRSGDKSAEAIAAFNEVKHDLGYGLLLKKYTAD 365
           + G++ L  EH  RIR G+ AY+ L+ LR+G+K+ E +AAF+EVKHDLGYGLLLK+YT  
Sbjct: 317 VVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRYTDK 376

Query: 366 VVDASEEQIKLAALDTIPNVFSLFWTFRVMVAAGFLMLLLFALASWASIKRDAESKPWLL 425
           V DA+EEQI+ AA D+IP V+ LFW+FR+MVA GF+ML++F  A   + ++  E K W+L
Sbjct: 377 VTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKKWVL 436

Query: 426 RFALFSLPLPWIAAQTGWYVAEHGRQPWSIAEVLPTHLSTSTLAAGDIWGSLIALVAFYS 485
           + ALFS+PLPWIA +TGW+VAE+GRQPW++ E+LP +++ S L+AG+I  S++A++A Y+
Sbjct: 437 KAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILALYT 496

Query: 486 LLLVIEMFLMIRFARLGPSSLHTGRYHFELEAIAA-SQVQRRRDA 529
           + L+ E++LM++F R GPSSL TGRYHFE  A +   QV R+ +A
Sbjct: 497 IFLIAEVYLMVKFTRKGPSSLKTGRYHFEQGAESVQDQVNRQVEA 541