Pairwise Alignments

Query, 546 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

Subject, 479 a.a., cytochrome bd quinol oxidase subunit 1 apoprotein from Pseudomonas syringae pv. syringae B728a

 Score =  259 bits (663), Expect = 1e-73
 Identities = 160/506 (31%), Positives = 241/506 (47%), Gaps = 68/506 (13%)

Query: 1   MISESVVDLSRLQFAMTAMYHFLFVPLTLGLAFLLAIMESVYVMTGKQVYKDMTQFWGKL 60
           M     +DL+R+QFA T  +H LF  +T+GLA  LA++E +++ T   VY+D+  FW K+
Sbjct: 1   MFGLEAIDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDVYRDLYHFWSKI 60

Query: 61  FGINFALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGW 120
           F +NF +GV +GL M +QFGTNW+ +S + G + G  L  E L AFFLE+ F+G+  FGW
Sbjct: 61  FAVNFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGW 120

Query: 121 DRLSKVQHLAVTWLVALGSNLSALWILIANGWMQNPVGSEFNFETMRMELVDFGALLFNP 180
           +R+ +  H   T +VA+G+ +S  WIL +N WMQ P G  F     R+   D+ A++FNP
Sbjct: 121 NRVGRNLHFFSTVMVAIGTLISTFWILSSNSWMQTPQG--FEIIDGRVIPTDWFAVVFNP 178

Query: 181 VAQVKFVHTVSAGYVTGAIFVLAISSFYLLKKRDLGFARRSFAIAAVFGLASTISVIILG 240
               +  H   A +V  A FV + ++++LL+ RD    R+  ++A    L       ++G
Sbjct: 179 SFPYRLTHMAIAAFVATAFFVGSSAAWHLLRGRDTPAVRKMLSMAMWMALLVAPVQAVVG 238

Query: 241 DESGYEIGDVQKVKLAAIEAEWDT-HPAPAGFTLFGLPNQQEMRTDYEVKIPYALGLIAT 299
           D  G      Q  K+AAIE  W+     P    LFG+P+ +E RT Y V+IPY       
Sbjct: 239 DFHGLNTLKHQPAKIAAIEGHWENVGDEPTPLILFGIPDMKEERTKYAVEIPY------- 291

Query: 300 RSVDEEIKGIKQLVAEHELRIRNGMLAYERLQVLRSGDKSAEAIAAFNEVKHDLGYGLLL 359
                    +  L+  H L                  DK   A+  F             
Sbjct: 292 ---------LGSLILTHSL------------------DKQVPALKEFKP----------- 313

Query: 360 KKYTADVVDASEEQIKLAALDTIPNVFSLFWTFRVMVAAGFLMLLLFALASWASIKRDAE 419
                               +  PN   +FW+FRVMVA G LM+     + W   +    
Sbjct: 314 --------------------EDRPNSTIVFWSFRVMVALGMLMIFTGLWSLWLRKRGTLY 353

Query: 420 SKPWLLRFALFSLPLPWIAAQTGWYVAEHGRQPWSIAEVLPTHLSTSTLAAGDIWGSLIA 479
           +    L  AL+  P   IA   GW+  E GRQPW +  ++ T  ++S  +   +  +L+ 
Sbjct: 354 NSRPFLYLALWMGPSGLIAILAGWFTTEIGRQPWVVYGLMRTADASSGHSVAQMSITLVL 413

Query: 480 LVAFYSLLLVIEMFLMIRFARLGPSS 505
            V  Y +L    +  M+R  R GP +
Sbjct: 414 FVVVYFVLFGTGLGYMMRLVRKGPKA 439