Pairwise Alignments

Query, 546 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

Subject, 483 a.a., cytochrome ubiquinol oxidase subunit I from Synechocystis sp000284455 PCC 6803

 Score =  223 bits (568), Expect = 1e-62
 Identities = 125/310 (40%), Positives = 177/310 (57%), Gaps = 6/310 (1%)

Query: 5   SVVDLSRLQFAMTAMYHFLFVPLTLGLAFLLAIMESVYVMTGKQVYKDMTQFWGKLFGIN 64
           + V LSRLQFA+TA++H L+  LT G+   L I+E +++ T    Y    +FW +L+ +N
Sbjct: 7   NTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYVLN 66

Query: 65  FALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLS 124
           F +GV TGL M FQFG NWA +S  VGD FG  L  EG MAF LE++F+G+  FGWDR+ 
Sbjct: 67  FGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVP 126

Query: 125 KVQHLAVTWLVALGSNLSALWILIANGWMQNPVGSEFNFETMRMELVDFGALLFNPVAQV 184
            + H   T LVA+G+NLS  WIL AN W+Q P G    F   +  + D+ A + NP    
Sbjct: 127 PLIHYLATILVAIGANLSTFWILSANSWLQTPAGG--IFVDGKFVVQDYFAAIANPFMVN 184

Query: 185 KFVHTVSAGYVTGAIFVLAISSFYLLKKRDLGFARRSFAIAAVFGLASTISVIILGDESG 244
            F+H   A   T    +  IS++ +L  R   F  RS  +  V  +A     I +G  S 
Sbjct: 185 SFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQVILVVVMAVAPLQIFIGHLSA 244

Query: 245 YEIGDVQKVKLAAIEAEWDTHPA--PAGFTLFGLPNQQEMRTDYEVKIPYALGLI--ATR 300
            ++   Q  KLAA+EA W+T PA  PA +++  LPN +  + D+E+ IP AL  I     
Sbjct: 245 EQVSVHQPAKLAAMEALWETVPAKTPAAWSVVALPNDKAEKNDWELSIPGALSYILELKP 304

Query: 301 SVDEEIKGIK 310
            +D+ I+G+K
Sbjct: 305 QLDKPIQGLK 314



 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)

Query: 377 AALDTIPNVFSLFWTFRVMVAAG--FLMLLLFALASWASIKRDAE---SKPWLLRFALFS 431
           A +D    V  ++++FR+MVA G  F  L+   +  W   K   E    + WLLR  +F+
Sbjct: 317 APVDRPRMVGLIYYSFRIMVAIGLFFAALMAVTVLQWLRGKLKPEIISQQKWLLRAWVFA 376

Query: 432 LPLPWIAAQTGWYVAEHGRQPWSIAEVLPTHLSTSTLAAGDIWGSLIALVAFYSLLLVIE 491
            PL ++A +TGW V   GRQPW +   + T  S S L  G+I  SL  L   Y + L+  
Sbjct: 377 APLGYLAVETGWIVRCVGRQPWIVYGEMRTAESASNLPPGEILFSLTGLSVMYIVFLIAT 436

Query: 492 MFLMIRFARLGP 503
           ++   R  R GP
Sbjct: 437 LYFGSRIIRNGP 448