Pairwise Alignments

Query, 546 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

Subject, 520 a.a., cytochrome bd-type quinol oxidase, subunit 1 cydA from Caulobacter crescentus NA1000

 Score =  612 bits (1579), Expect = e-180
 Identities = 300/503 (59%), Positives = 382/503 (75%), Gaps = 1/503 (0%)

Query: 5   SVVDLSRLQFAMTAMYHFLFVPLTLGLAFLLAIMESVYVMTGKQVYKDMTQFWGKLFGIN 64
           +VVDLSRLQFA+TA+YHFLFVPLTLGL+F+L IMES+YVMT + +++ +T+FWG LFGIN
Sbjct: 4   AVVDLSRLQFALTALYHFLFVPLTLGLSFMLVIMESIYVMTKRPIWRTITRFWGTLFGIN 63

Query: 65  FALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLS 124
           F LGV TG+TMEFQFG NW+YYSHYVGDIFGAPLAIEGLMAFFLE+TF+GL FFGWD+LS
Sbjct: 64  FVLGVATGITMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLMFFGWDKLS 123

Query: 125 KVQHLAVTWLVALGSNLSALWILIANGWMQNPVGSEFNFETMRMELVDFGALLFNPVAQV 184
           +V HL VT++VALG+NLSALWIL+ANGWMQNP+G+ FN +TMRME+  F  +LFNPVAQ 
Sbjct: 124 RVGHLFVTFMVALGTNLSALWILVANGWMQNPIGAAFNTDTMRMEVESFREVLFNPVAQA 183

Query: 185 KFVHTVSAGYVTGAIFVLAISSFYLLKKRDLGFARRSFAIAAVFGLASTISVIILGDESG 244
           KFVHTVSAGYV  A FVL +S+FYLLK +  G A+RS  +AA FGLAS++SV++LGDESG
Sbjct: 184 KFVHTVSAGYVIAAAFVLGVSAFYLLKGKYPGVAKRSMTVAAAFGLASSLSVVVLGDESG 243

Query: 245 YEIGDVQKVKLAAIEAEWDTHPAPAGFTLFGLPNQQEMRTDYEVKIPYALGLIATRSVDE 304
           Y + D QK+KLAA+EA W+T PAPAG   FG+P+  + +T YEVKIPY LGLIATRS+D+
Sbjct: 244 YALTDNQKMKLAALEAMWETEPAPAGLAAFGIPSMADRKTHYEVKIPYVLGLIATRSLDK 303

Query: 305 EIKGIKQLVAEHELRIRNGMLAYERLQVLRSGDKSAEAIAAFNEVKHDLGYGLLLKKYTA 364
            ++GI +LVA+ E RI +G++AY  ++ L+       A A F + + DLGYGLLLK++ A
Sbjct: 304 PVEGIFELVAKAEDRIESGVIAYGAVEALKVNPNDMAARATFEQHRRDLGYGLLLKRHIA 363

Query: 365 DVVDASEEQIKLAALDTIPNVFSLFWTFRVMVAAGFLMLLLFALASWASIKRDAESKPWL 424
           D   AS E IK  A D +P V  +FW FRVM   GFLM+LLFA A      R  ++K W 
Sbjct: 364 DPRQASPELIKQTAWDVVPPVPVMFWAFRVMAGIGFLMILLFATAFVLVTLRKHQTK-WF 422

Query: 425 LRFALFSLPLPWIAAQTGWYVAEHGRQPWSIAEVLPTHLSTSTLAAGDIWGSLIALVAFY 484
           L  A+ ++PLPWIAA+ GW +AE GRQPW++  VLPT L  S+L    +  S+      Y
Sbjct: 423 LVLAVAAIPLPWIAAEMGWVLAEVGRQPWAVEGVLPTFLGASSLTVPQLLISIAVFTLLY 482

Query: 485 SLLLVIEMFLMIRFARLGPSSLH 507
             L V+E+ L+++  + GP +LH
Sbjct: 483 GALAVVEVGLILKTIKRGPYALH 505