Pairwise Alignments

Query, 303 a.a., cobalamin biosynthesis protein CobD from Pseudomonas stutzeri RCH2

Subject, 303 a.a., cobalamin biosynthesis protein CobD (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  174 bits (442), Expect = 2e-48
 Identities = 118/291 (40%), Positives = 155/291 (53%), Gaps = 15/291 (5%)

Query: 10  ALLLDALLGEP-----KRAHPLVAFGRLADRLEQHFNGAAARGWRSHGVTAWCLAVLPLT 64
           ALLLDA+ GEP     +  HP V  GRL    ++  N    R  R  G+    L ++ L 
Sbjct: 11  ALLLDAVFGEPDWLWTRLPHPAVLMGRLVAGADKRLN--KHRDLRFRGI----LVMIALG 64

Query: 65  LLAWLLSL-LPSVGWLVEIVLLYLALGLRSLGEHALPVAQALWRNDLSEARRRVGWIVSR 123
           L A +L   L ++G +VE++L  + L  RSL +H   VA  L  + L+  R +V  IV R
Sbjct: 65  LGALVLGAGLAALGPVVEVLLAAILLAQRSLVDHVRAVATGL-SDSLAAGRAKVAMIVGR 123

Query: 124 DTTQLDEEGVARAATESVLENGSDAVFAALFWFIVAGAPGVVLYRLSNTLDAMWGYRNAR 183
           DT  LD  GVARAA ES  EN SD V A  FWF++ G PG++LY+++NT D+M GYR  R
Sbjct: 124 DTEPLDAAGVARAAIESGAENFSDGVLAPAFWFLIGGLPGLLLYKITNTADSMIGYRTPR 183

Query: 184 FERFGWAAARIDDLLNYLPARLVALTYALLGRTRRALRCWRTQAPLWDSPNAGPVMASGA 243
           +  FGWAAAR DDLLN++PAR+ AL   +              APL  SPNAG   A+ A
Sbjct: 184 YAEFGWAAARFDDLLNWVPARISALVILVAAGRPGGWPVILRDAPLHRSPNAGWPEAAMA 243

Query: 244 GALGVVLGGSAIYHGEVHARPEL--GRGKAPQARHIEHALDLVWAGVGVWL 292
            +L V L G   Y G +   P +     + P    IE A   +W   G  L
Sbjct: 244 VSLDVALSGPRSYEGAIRDFPFVHPDGTRTPGPAEIEAACTALWRSWGAML 294