Pairwise Alignments

Query, 142 a.a., RNAse H-fold protein YqgF from Pseudomonas stutzeri RCH2

Subject, 140 a.a., Holliday junction resolvase RuvX from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (339), Expect = 3e-37
 Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 1/132 (0%)

Query: 5   RLLLGFDYGTKQIGVAVGQMITGQARELCVLKAQNGVPDWQQIEALMREWQPDALVVGLP 64
           R ++ FDYGTK IG A+GQ ITG A  L   KA +G+P+W +IE  ++EWQP+ L+VGLP
Sbjct: 3   RTVMAFDYGTKSIGSAIGQEITGTASPLKAFKANDGIPNWDEIEKQIKEWQPNLLIVGLP 62

Query: 65  LNMDGTPSD-MSARAEKFARRLHGRFNLPVHTHDERLTTFEAKGERLRQGQHGGYRDRPV 123
            ++ G   D ++ RA+KFA+RLHGRF LPV  HDERL+T EA+ E    G +       V
Sbjct: 63  TDLHGKDLDTITPRAKKFAQRLHGRFGLPVELHDERLSTTEARAELFAMGGYKALSKGNV 122

Query: 124 DALAAALLLEGW 135
           D  +A ++LE W
Sbjct: 123 DCQSAVIILESW 134